| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0905 |
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| Symbol | |
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| ID | 8018537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 946889 |
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| End bp | 948271 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829685 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_002980878 |
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| Protein GI | 241662518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.269998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAACACC TTCAACGCAA CCTGCGCGCG CGGCATATCC GCTTTCTCGC GCTCGGTTCG
GCCATCGGCA CGGGCCTTTT CTACGGGTCC GCTTCGGCCA TCCAGCTGGC CGGGCCGGCC
GTGATCCTCG CGTACATCAT CGGCGGCGCG GCCGTCTACA TGGTCATGCG CGCGCTTGGC
GAGATGGCGG TGCGCCAGCC GGTTTCCGGC TCCTTCGGGC GCTATGCGCG CGACAACCTC
GGTCCGCTCG CCGGCTTTCT CACCGGCTGG ACGTACATCC TCGAAATGGT GATCGTCTGC
CTGGCCGACG TAACCGCCTT CGGCATCTAC ATGGGCTTCT GGTTTCCCGA GGTGCCGCAA
TGGATCTGGG TGCTGGGCAT CGTCATGCTC ATCTGCGGCC TGAACCTTTG CAACGTCAAG
GTGTTCGGCG AGATGGAATT CTGGCTCGCG CTGATCAAGA TCGTGGCGAT CGGCGCCATG
ATCGTCGGCG GCACCGTCAT CCTGTTCCTC GGCGTGAAGA TGAATGGCGA GCACGCGTCG
GGCTTGAGCA ATCTCTGGTC GCACGGCGGG TTCCTGCCGC ATGGCGTGGG CGGCCTCATA
GCGTCGTTTG CCGTGGTGAT GTTTGCGTAC GGCGGCGTCG AGATCATCGG CATCACTGGC
GGCGAGGCGC AGAACCCCGA CAAGGTCATC CCGAAGGCCA TCAATGCCGT GCCGGCGCGC
ATCCTGTTGT TCTACGTGCT GACCATGTGC GTGCTGATGG CGATCTTCCC GTGGACGGGC
ATCGACGGCC AGGGCAGCCC GTTCGTGCAG ATCTTCTCCG GACTGGGCAT CCAGTCTGCG
GCGGCGATCC TGAACCTCAT CGTCATTTCG GCAGCCATCT CGGCCATCAA CAGCAACATC
TTCGGCGCGG GCCGGATGAT GTACGGCATG GCCGAGCAGG GCCAGGCGCC ACGCATCTTT
GCGGCCACGT CGCGTCACGG TGTGCCCTGG GTGACGGTGC TGTTCATGGC CGGCGCGCTG
CTGTGCGGCG TGGTGCTGAA CTATCTGATT CCCGAAAACG TCTTCGTGAT CATCGCGTCG
ATCGCCACGT TCGCGACCGT CTGGGTCTGG CTGATGATCC TGCTCTCGCA GGTGGCCATG
CGCCGGCGTC TGTCGGCTGA AGAGGTGCGC GCGCTCAAGT TCAAGGTGCC GCTTTGGCCT
GTCGGGCCGG CGCTCGCCAT CGCGTTCATG CTGTTCGTGA TTGGCGTGCT GGGCACCATG
GAAGACACGC GCGTGGCGCT CTACGTTGGC GCAGGCTGGG TGCTGCTCAT GTCGACAGCG
TGGTATCTGC GCGTGAAGCC CAACGCAGCA TCCGTGTTGG CTGAAGAGGC AAGCGGGGTT
TGA
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| Protein sequence | MEHLQRNLRA RHIRFLALGS AIGTGLFYGS ASAIQLAGPA VILAYIIGGA AVYMVMRALG
EMAVRQPVSG SFGRYARDNL GPLAGFLTGW TYILEMVIVC LADVTAFGIY MGFWFPEVPQ
WIWVLGIVML ICGLNLCNVK VFGEMEFWLA LIKIVAIGAM IVGGTVILFL GVKMNGEHAS
GLSNLWSHGG FLPHGVGGLI ASFAVVMFAY GGVEIIGITG GEAQNPDKVI PKAINAVPAR
ILLFYVLTMC VLMAIFPWTG IDGQGSPFVQ IFSGLGIQSA AAILNLIVIS AAISAINSNI
FGAGRMMYGM AEQGQAPRIF AATSRHGVPW VTVLFMAGAL LCGVVLNYLI PENVFVIIAS
IATFATVWVW LMILLSQVAM RRRLSAEEVR ALKFKVPLWP VGPALAIAFM LFVIGVLGTM
EDTRVALYVG AGWVLLMSTA WYLRVKPNAA SVLAEEASGV
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