| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0902 |
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| Symbol | |
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| ID | 8018534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 943199 |
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| End bp | 945541 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829682 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_002980875 |
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| Protein GI | 241662515 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0287321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAC AAGACATCCT CTTCGACCCC AGCGAGCCGG CCGAAGCGCT CACGCTTGGC
GCCTATGCCG AGCGCGCTTA CCTCGACTAC GCCATCAGCG TGGTCAAGGG CCGCGCACTG
CCCGAGGTGG CCGATGGTCA GAAGCCGGTG CAGCGCCGCA TCCTGTTCGC GATGCACGAG
ATGGGCCTGC GCTCCGATGC CAAGCCTGTC AAATCGGCGC GCGTGGTCGG CGACGTGCTG
GGCAAATTCC ACCCGCATGG CGATCAATCC GCCTACGACG CACTGGTGCG CCTGGCGCAG
GATTTCTCGC TGCGTTACCC GCTGATCGAC GGGCAGGGCA ACTTCGGCTC GCGCGACGGC
GACGGTGCGG CGGCGATGCG CTATACCGAA GCGCGCCTCA CGCCCATTTC GCGTCTGCTG
CTCGAAGAGC TGGACCAGGG CACCGTCGAT TTCATCCCGA ACTACGACGG CTCGATGGAA
GAGCCGAAGC TGCTGCCGGC GCGCTTGCCG TTCGTGCTGC TCAACGGCGC ATCGGGCATT
GCGGTCGGGA TGGCCACGGA GATCCCGTCG CACAATTTGC GCGAAGTGGC GGCCGCCACC
GTGGCGCTCA TCCGCGACGA CAAGCTCACC AGCACCGACC TGATGCAGTA CATGCCGGGC
CCGGACTTCC CGGGTGGCGG TCAGATCATT TCGTCGGCAG CGGACATTGC GCAGGTGTAC
GAGAGCGGTC GCGGCAGCCT GAAGGTGCGC GCGCGCTGGA AGATCGAAGA ACTCGCACGC
GGCCAGTGGC AACTCGTAGT GAACGAATTG CCGCCCAACA CCTCGTCGCA GAAGGTGTTG
GAAGAGATTG AAGAGCTGAC GAACCCGAAG GTGCGCACGG GCAAGAAGTC GCTGTCGCCG
GATCAGCTCA CCATGAAGCA GACCATGCTG GGTCTGCTCG ATGCCGTGCG CGACGAGTCC
GGCAAGGACG CGCCGGTGCG CCTTGTGTTC GAACCCAAGA GCAAGAACAT CGACCAGCAG
GAATTTGCCA ACGCGCTGCT CGCCCATACG TCGCTGGAGT CGGGCGCGGC CATCAACCTG
GTGATGATCG GCACGGATGG CCGGCCGCGC CAGAAGGGCC TGGCCGAGAT CCTGCGCGAG
TGGATCACGT ACCGCTTCGC CACGGTCACG CGCCGCACGC GCCATCGTCT GGGCAAGGTG
GAAGACCGCA TCCACATCCT GGAAGGGCGG CAACTGGTAC TGCTGCGCAT TGAGGACGTG
ATCCGCATCA TCCGCGAGAG CGAGGAACCC AAGGCCGCGC TGATCCAGGT CTTCAACCTG
AGCGACCGCC AGGCCGAAGA CATTCTGGAA ATCCGCCTGC GTCAGCTTGC TCGCCTGGAA
GCGATCAAGA TCGAGCAGGA GCTGAAGAAC CTGCGCGAAG AGCAGGGCGA GCTGGACGTG
CTGCTGAAGT CCGAGACCAT GATGCGCCGT CGCATCATCA AGGAAATCGA GACCGACGCG
AAGCAATATG GCGACGACCG CCGCACTCTC ATCCAGGAAG AGCGCCGTGC CGCCGCCGAG
GTGAAGATCG TCGATGAACC CGTCACGGTG ATTGTTTCGC AGAAGGGCTG GGTACGTACG
CGCCAGGGCC ATGGCCACGA CGCCACGCAA TTCACCTTCA AGGCAGGCGA CACGCTGTAC
GACACGTTTG AATGCCGGAC CACCGATGCG CTGTTGATCT TCGGCACGCG CGACGACAAG
GGCACGGGCC GCGTCTATTC CGTGGCTGTG GCCAACCTCC CGGGCGGCCG TGGCGATGGC
GTGCCGCTGA CGACGCTGAT CGAACTCGCG CCGGGCACGC ACATCGCCCA CACGTTCGCA
GGCCATGCCG AACAGAATCT GGTGATTTCC ACGCGCGGCG GCAACGGCTT CCTGGCCAAG
GTGGGCGACA TGGTCGGCCG CCAGAAGGCT GGCAAGGCGT TCCTGACGCT GGATGAGGGC
GACCAGCCCA ACAAGCCGGC GCCGGTGCCG GCTGACGCCT ATGGCGTGGC GTGCCTGTCC
GAAGGCGGCC GCTTGCTGTT GTTCCAGATC AGCGAGTTGA AGACGCTCGC AAGCGGCGGC
CGTGGCGTGA TCCTGATGGA GCTGGAGAAG AACGAAGCGC TGCTCCAGGC GGTGGCCTTT
GGTGCAGCGG GCTTCGTGCT CTCTGGCACC GGCCCACGCG GCGGCAAGGC GGTCGAGCAG
ACTATGACGA CCCGCGCGCA GGAGCCGTAC GCCGGCAAGC GCGCACGCAA GGGTAAGACG
CTCGAGCCGA AGCTGCGTGA TCCGAAGCTC TCGTTGCCCA AGCCCGCCCC GGACGTCGCC
TGA
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| Protein sequence | MEQQDILFDP SEPAEALTLG AYAERAYLDY AISVVKGRAL PEVADGQKPV QRRILFAMHE
MGLRSDAKPV KSARVVGDVL GKFHPHGDQS AYDALVRLAQ DFSLRYPLID GQGNFGSRDG
DGAAAMRYTE ARLTPISRLL LEELDQGTVD FIPNYDGSME EPKLLPARLP FVLLNGASGI
AVGMATEIPS HNLREVAAAT VALIRDDKLT STDLMQYMPG PDFPGGGQII SSAADIAQVY
ESGRGSLKVR ARWKIEELAR GQWQLVVNEL PPNTSSQKVL EEIEELTNPK VRTGKKSLSP
DQLTMKQTML GLLDAVRDES GKDAPVRLVF EPKSKNIDQQ EFANALLAHT SLESGAAINL
VMIGTDGRPR QKGLAEILRE WITYRFATVT RRTRHRLGKV EDRIHILEGR QLVLLRIEDV
IRIIRESEEP KAALIQVFNL SDRQAEDILE IRLRQLARLE AIKIEQELKN LREEQGELDV
LLKSETMMRR RIIKEIETDA KQYGDDRRTL IQEERRAAAE VKIVDEPVTV IVSQKGWVRT
RQGHGHDATQ FTFKAGDTLY DTFECRTTDA LLIFGTRDDK GTGRVYSVAV ANLPGGRGDG
VPLTTLIELA PGTHIAHTFA GHAEQNLVIS TRGGNGFLAK VGDMVGRQKA GKAFLTLDEG
DQPNKPAPVP ADAYGVACLS EGGRLLLFQI SELKTLASGG RGVILMELEK NEALLQAVAF
GAAGFVLSGT GPRGGKAVEQ TMTTRAQEPY AGKRARKGKT LEPKLRDPKL SLPKPAPDVA
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