| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0900 |
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| Symbol | |
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| ID | 8018532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 940257 |
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| End bp | 942242 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829680 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_002980873 |
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| Protein GI | 241662513 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.573565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.687535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA CCTCCCAATA CAGCGAATCG TCGATCAAGG TCCTCAAGGG CCTCGAACCG
GTCAAGCAAC GGCCGGGCAT GTACACGCGC ACCGACAATC CCCTGCACAT CGTGCAGGAA
GTCATCGACA ACTCCGCTGA CGAGGCGTTG GGCGGCTACG GCAAGCTGAT TGCCGTGACG
CTGCACAAGG ACGGCAGCGT GAGCGTGGAA GACGATGCGC GCGGCATTCC CGTCGGCATC
CACCCCGAAG AGGGCGTGCC GGTGGTCGAG ATCGTCTACA CGCGCCTGCA CGCCGGCGGC
AAGTTCGACA AGGGCCGAGG CGGCGCATAT GCGTTCTCCG GCGGCTTGCA CGGCGTTGGC
GTGTCGGTCA CGAACGCGCT GTCGAAGCGG CTGGAGGTGA CGGTCTGGCG TGACGGCAAC
GTGTCGACGC TCGCATTCTC CGGTGGCGAC GTGATCGAAC CGCTAACCAC CCGCAAGGCC
GAACGCGGCG AGAAGAAGAG CGGCACACGC GTGCGCGCGT GGCCGGACGC CAAGTATTTC
GATTCCGAGA ACATCCCGCA GGCCGAGCTG CAGCGCTTGC TGCGCAGCAA GGCCGTGCTG
CTGCCGGGCG TGAAGGTCAC GCTCACGCTG GAAAAAACCG GCGAGACGCT CGAATGGCAA
TACGACCAGG GCCTGCGCGG CTATCTGGTC GAATCGCTTG CGCAGGGCAG CGGTGCCGAG
CCGGTGATTC CGCTGTTTGA AGGCGAACAC TTTGCCGACC CTGACAAGCC CGGCGAAGAA
GGTTTTGCCT TCGGCGAAGG CGCATCGTGG GTGGTGGCCT GGACGGAAGA GGGCTCGCCG
GTGCGTGAGT CATACGTCAA CCTCATCCCG ACGCCCGCCG GCGGCACGCA CGAATCCGGT
TTGCGCGAAG GCCTGTTCCA GGCTGTGAAG AGCTTTGTCG AGATGCACGC GCTCCTGCCC
AAGGGCGTCA AGCTGATGTC CGAAGACGTG TTTGCGCGCG CTTCGTTCGT GCTGTCGGCC
AAGGTGCTCG ACCCGCAATT CCAGGGTCAG ATCAAGGAAC GCCTGAATAG CCGCGATGCG
GTGCGCCTGG TGTCCACCTT CAGCCGCCCG GCGCTGGAAC TGTGGCTGAA CCAGCACGTC
GACCATGGCA AGAAGCTGGC CGAACTCGTC ATCAAGCAGG CGCAGGCGCG TACACGTGCC
GCGCAGAAGG TCGAGAAGAA GAAGGGCTCC GGCGTGGCCG TGTTGCCCGG CAAACTGACC
GATTGCGAAT CCGACGACGT CACCCGCAAC GAACTCTTTC TGGTGGAAGG CGACTCCGCC
GGTGGCTCGG CCAAGATGGG CCGCGACAAG GAATTCCAGG CCATCCTGCC GTTGCGCGGC
AAGGTGCTGA ACACCTGGGA AACCGAGCGC GACCGCCTGT TCGCCAACAA CGAGGTGCAT
GACATTGCTG TCGCCATCGG CGTGGACCCG CACGGGCCGA CGGATACGGT CGACCTCTCC
GGCCTGCGCT ACGGCAAGAT CTGCATCCTG TCCGATGCTG ACGTGGACGG CGCGCACATC
CAGGTTCTGC TGCTCACGTT GTTCTTCAAG CACTTCCCGC AATTGATCGA TCGCGGGAAC
GTATGCGTGG CCCGTCCGCC GCTGTATCGT GTCGATGCCC CGGCGCGTGG CAAGAAGCCC
GCGCAAAAGC TCTACGCGCT GGATGACGGC GAGCTAGAAG CCATTGAAGA CAAACTGCGC
AAGGATGGCG TGAAAGAGGG CGCCTGGCAG ATTTCCCGCT TCAAGGGCCT GGGCGAAATG
AGCGCCGAGC AGCTCTGGGA AACCACCATG AACCCCGATA CGCGCCGTCT GCTGCCCGTG
GCGCTGGGCG AACTGGGCCA AGACCAGACC ATCAACATGA TGAACATGCT GATGGGCAAG
GGCGAAGCCG GCGCGCGCCG CACGTGGCTG GAAGCGCGCG GCAACGAAGT CGAAGCCGAT
ATCTGA
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| Protein sequence | MSKTSQYSES SIKVLKGLEP VKQRPGMYTR TDNPLHIVQE VIDNSADEAL GGYGKLIAVT
LHKDGSVSVE DDARGIPVGI HPEEGVPVVE IVYTRLHAGG KFDKGRGGAY AFSGGLHGVG
VSVTNALSKR LEVTVWRDGN VSTLAFSGGD VIEPLTTRKA ERGEKKSGTR VRAWPDAKYF
DSENIPQAEL QRLLRSKAVL LPGVKVTLTL EKTGETLEWQ YDQGLRGYLV ESLAQGSGAE
PVIPLFEGEH FADPDKPGEE GFAFGEGASW VVAWTEEGSP VRESYVNLIP TPAGGTHESG
LREGLFQAVK SFVEMHALLP KGVKLMSEDV FARASFVLSA KVLDPQFQGQ IKERLNSRDA
VRLVSTFSRP ALELWLNQHV DHGKKLAELV IKQAQARTRA AQKVEKKKGS GVAVLPGKLT
DCESDDVTRN ELFLVEGDSA GGSAKMGRDK EFQAILPLRG KVLNTWETER DRLFANNEVH
DIAVAIGVDP HGPTDTVDLS GLRYGKICIL SDADVDGAHI QVLLLTLFFK HFPQLIDRGN
VCVARPPLYR VDAPARGKKP AQKLYALDDG ELEAIEDKLR KDGVKEGAWQ ISRFKGLGEM
SAEQLWETTM NPDTRRLLPV ALGELGQDQT INMMNMLMGK GEAGARRTWL EARGNEVEAD
I
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