| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0860 |
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| Symbol | |
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| ID | 8018491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 901469 |
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| End bp | 902392 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829639 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002980833 |
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| Protein GI | 241662473 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.684405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCG GCCTCTACAC GCATCCCGAA TTTCTCCGGC ACGAGATGGG CCCGCACCAT
CCCGAATGCC CGGACCGCCT GCGCGCGATC GAAGACCAGC TCATCGCCAG CCGCATTGAA
GACTTGCTCG TCCCGTGCGA GGCGCCCCCT GCCACCGAGG CGCAGCTGTG TCGCGTGCAT
CGTGCCGAAT ACGTGCGCGA GCTGGTGGCC AGTGTGCCGA TTGCCGGCTA TATGCCGATC
GATCCCGACA CGTCGATGAA CCCGCACACC TATATGGCCG CAGTGCTGGC CGCCGGTGCG
GCGGTGGATG CCACCGACAA GGTCATCGCA GGCGAACTTG AAAATGCTTT CTGCAGCGTC
CGCCCGCCCG GCCACCATGC CGAGCCTGGC CGCGCGATGG GCTTTTGCTT CTTCAACAAC
GTGGCCGTGG CCGCGCGTCA CGCACTGGAG CATCACGGCT TGCAGCGCGT GGCGATCGTC
GACTTTGATG TCCACCATGG CAACGGCACC GAAGCGGCCT TCCGCGATGA GCCCCGCGTG
CTGATGTGCA GCATCTTCCA GCACCCGTTC TATCCGTATT CCGGCACCGA GGCGGTGGCG
GCCAACATGG TCAACATTCC GCTACCGGCG TATACCAATG GCCTGACCGT ACGCGAGGTG
GTGGAGACCA TCTGGCTGCC GCGCCTGGAG GCGTTCGAGC CCGAGATGCT GTTCATTTCT
GCCGGCTTCG ATGCGCATCG CGAAGACGAT CTGGGCCAGA TGGGCCTGGT CGAGGCGGAC
TACGCCTGGA TTACGAAACA GCTGATGCAA GTGGCGCGCA AACACGCCAA GGGCCGGATC
GTCAGCTGTC TGGAGGGCGG CTACAACCTC AGCGCGCTTG GCCGCAGCGT GGTGGCGCAC
GTCAAGGCGC TTGCCGAGCT TTAG
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| Protein sequence | MATGLYTHPE FLRHEMGPHH PECPDRLRAI EDQLIASRIE DLLVPCEAPP ATEAQLCRVH
RAEYVRELVA SVPIAGYMPI DPDTSMNPHT YMAAVLAAGA AVDATDKVIA GELENAFCSV
RPPGHHAEPG RAMGFCFFNN VAVAARHALE HHGLQRVAIV DFDVHHGNGT EAAFRDEPRV
LMCSIFQHPF YPYSGTEAVA ANMVNIPLPA YTNGLTVREV VETIWLPRLE AFEPEMLFIS
AGFDAHREDD LGQMGLVEAD YAWITKQLMQ VARKHAKGRI VSCLEGGYNL SALGRSVVAH
VKALAEL
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