Gene Rpic12D_0851 details

Gene Information

• Locus tag: Rpic12D_0851
• Symbol: ihfB
• ID: 8018482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12D
• Kingdom: Bacteria
• Replicon accession: NC_012856
• Strand: +
• Start bp: 893041
• End bp: 893469
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644829630
• Product: integration host factor subunit beta
• Protein accession: YP_002980824
• Protein GI: 241662464
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0776] Bacterial nucleoid DNA-binding protein
• TIGRFAM ID: [TIGR00988] integration host factor, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.254364
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.669771
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCATGA CCAAGTCCGA ACTCGTGGAA AAGCTGGCCG CCCGCTTTCC GCAGTTGCTG 
CTGCGGGATG CGGACATCGC GGTCAAGACG ATCCTCGATG CGATGTCCGA CGCGCTGGCG 
GACGGGCACC GCATCGAGAT CCGCGGGTTC GGGAGTTTCG GTCTGAATCG TCGTCCGCCC 
CGAGTCGGTC GCAATCCCAA GTCCGGCGAG AAGGTGCTGG TCCCTGAGAA ACGGGTGCCG 
CACTTCAAGG CCGGCAAGGA ATTGCGAGAA AGGGTCGACC GCAGTTTGGA GCGACAAGGC 
GAGCCTTCTT CGGAGGGCGA GCCTGCCGTG TCGCTTGCGG CTGTAAAGGC CGGCCGACAG 
GTTGACAGTA GCCGTCAGAC TGCCGGTTTT CCGGTAGATG GGTCGGTGCC GCTGGCCATG 
TCGCGCTAA 

 

Protein sequence

MPMTKSELVE KLAARFPQLL LRDADIAVKT ILDAMSDALA DGHRIEIRGF GSFGLNRRPP 
RVGRNPKSGE KVLVPEKRVP HFKAGKELRE RVDRSLERQG EPSSEGEPAV SLAAVKAGRQ 
VDSSRQTAGF PVDGSVPLAM SR