Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0851 |
Symbol | ihfB |
ID | 8018482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 893041 |
End bp | 893469 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829630 |
Product | integration host factor subunit beta |
Protein accession | YP_002980824 |
Protein GI | 241662464 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.254364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.669771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATGA CCAAGTCCGA ACTCGTGGAA AAGCTGGCCG CCCGCTTTCC GCAGTTGCTG CTGCGGGATG CGGACATCGC GGTCAAGACG ATCCTCGATG CGATGTCCGA CGCGCTGGCG GACGGGCACC GCATCGAGAT CCGCGGGTTC GGGAGTTTCG GTCTGAATCG TCGTCCGCCC CGAGTCGGTC GCAATCCCAA GTCCGGCGAG AAGGTGCTGG TCCCTGAGAA ACGGGTGCCG CACTTCAAGG CCGGCAAGGA ATTGCGAGAA AGGGTCGACC GCAGTTTGGA GCGACAAGGC GAGCCTTCTT CGGAGGGCGA GCCTGCCGTG TCGCTTGCGG CTGTAAAGGC CGGCCGACAG GTTGACAGTA GCCGTCAGAC TGCCGGTTTT CCGGTAGATG GGTCGGTGCC GCTGGCCATG TCGCGCTAA
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Protein sequence | MPMTKSELVE KLAARFPQLL LRDADIAVKT ILDAMSDALA DGHRIEIRGF GSFGLNRRPP RVGRNPKSGE KVLVPEKRVP HFKAGKELRE RVDRSLERQG EPSSEGEPAV SLAAVKAGRQ VDSSRQTAGF PVDGSVPLAM SR
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