| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0850 |
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| Symbol | rpsA |
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| ID | 8018481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 891307 |
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| End bp | 892995 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644829629 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002980823 |
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| Protein GI | 241662463 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.334273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAA CTAACGAATC TTTTGCCGCC CTGTTCGAAG AGTCGATCGC CAAGTCCAAT
ATGAAGGCTG GCGAAGTGAT CTCTGCGGAA GTTGTGCGTA TCGACCACAA CTTCGTCGTT
GTGAACGCGG GCCTGAAGTC TGAAGCTTTT GTTCCGGTCG AAGAGTTCCT GAACGATCAG
GGCGAGCTGG AAGTGCAAGT CGGCGACTAC GTTTCGGTCG CAATCGACGC GCTGGAAAAC
GGCTACGGCG ACACGATCCT GTCGCGCGAC AAGGCCAAGC GTCTGGCTTC GTGGCTGAAC
CTTGAGAAGG CACTGGAATC CGGCGAGATC ATCTCCGGTA CGGTGACCGG CAAGGTCAAG
GGCGGCCTGA CCGTCATGGT CAACGGTATT CGTGCATTCC TGCCGGGTTC GCTCGTCGAC
GTGCGTCCGA TCAAGGACAC CACGCCGTAC GAAGGCAAGA CCCTCGAATT CAAGGTCATC
AAGCTGGATC GCAAGCGCAA CAACGTTGTG CTGTCGCGCC GTGCCGTGGT CGAAGCCACG
CTGGGCGAAG AGCGTCAGAA GCTGATGGAA ACGCTCAAGG AAGGTGCAAT CGTCAACGGT
ATCGTCAAGA ACATCACCGA CTACGGCGCG TTCGTGGATC TGGGTGGCAT CGACGGTCTG
CTGCACATCA CCGACCTGGC ATGGCGTCGT GTGCGTCACC CGAGCGAAGT GCTGTCGGTT
GGCCAGGAAA TCACCGCCAA GATCCTCAAG TTCGACCAAG AGAAGAACCG CGTCTCGCTG
GGCGTCAAGC AACTGGGCGA AGATCCGTGG GTCGGCATCT CGCGCCGCTA CCCGCAAGGC
ACCCGCCTGT TCGGCAAGGT GACCAACCTG ACCGACTACG GCGCGTTCGT TGAGATCGAA
GCCGGCATCG AAGGCTTGGT GCACGTGTCG GAAATGGACT GGACCAACAA GAACGTTGCT
CCGTCCAAGG TTGTCCAGCT GGGCGACGAA GTGGAAGTCA TGGTCCTGGA CATCGATGAA
GACAAGCGTC GTATCAGCCT GGGCATGAAG CAGTGCAAGG CCAACCCGTG GGACGATTTC
GCTCGTAACC ACAAGAAGGG CGACAAGCTG GCCGGCCAGA TCAAGTCGAT CACCGACTTC
GGCGTGTTCA TCGGCCTGCC GGGCGGCATC GACGGCCTGG TGCACCTGTC GGACCTGTCG
TGGCAAGAGA CTGGCGAAGA AGCCGTTCGC AAGTACAAGA AGGGCGACGA AGTGGAAGCC
GTGGTGCTGG CGATCGACGT CGACAAGGAA CGCATCTCGC TGGGTATCAA GCAACTGTCG
GGCGACCCGT TCAACAACTT CGTGTCGACC AACGACAAGG GCTCGATCGT GCAGGTCACG
ATCAAGACCG TTGATCCGAA GGGCGCCGTT GTGCAGCTGG CTGACGACGT GGAAGGCTAC
CTGCGTGCCT CGGAAATCTC GAGCGACCGC GTGGAAGACG CCCGCAACGT GCTGAAGGAA
GGCGAAACGA TGACCGCGAT GATCGTCAAC ATCGATCGCA AGTCGCGCAA CATCAACGTC
TCCATCAAGG CGAAGGACAG CGCCGACCAA CAGGAAGCGA TGCAGAAGTT CTCGGCGGAT
ACCGGCGCAG CTGGTACCAC GAACCTCGGC GCGCTGCTGA AGGCCAAGCT GAACGAAACC
AACCAGTAA
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| Protein sequence | MSQTNESFAA LFEESIAKSN MKAGEVISAE VVRIDHNFVV VNAGLKSEAF VPVEEFLNDQ
GELEVQVGDY VSVAIDALEN GYGDTILSRD KAKRLASWLN LEKALESGEI ISGTVTGKVK
GGLTVMVNGI RAFLPGSLVD VRPIKDTTPY EGKTLEFKVI KLDRKRNNVV LSRRAVVEAT
LGEERQKLME TLKEGAIVNG IVKNITDYGA FVDLGGIDGL LHITDLAWRR VRHPSEVLSV
GQEITAKILK FDQEKNRVSL GVKQLGEDPW VGISRRYPQG TRLFGKVTNL TDYGAFVEIE
AGIEGLVHVS EMDWTNKNVA PSKVVQLGDE VEVMVLDIDE DKRRISLGMK QCKANPWDDF
ARNHKKGDKL AGQIKSITDF GVFIGLPGGI DGLVHLSDLS WQETGEEAVR KYKKGDEVEA
VVLAIDVDKE RISLGIKQLS GDPFNNFVST NDKGSIVQVT IKTVDPKGAV VQLADDVEGY
LRASEISSDR VEDARNVLKE GETMTAMIVN IDRKSRNINV SIKAKDSADQ QEAMQKFSAD
TGAAGTTNLG ALLKAKLNET NQ
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