Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0845 |
Symbol | |
ID | 8018476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 885824 |
End bp | 886939 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829624 |
Product | chorismate mutase |
Protein accession | YP_002980818 |
Protein GI | 241662458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0602148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAGTC AGTCAGACGA TACGAAGCAA AACAAGGACG CTGCATTGGC GGCGGAGCTT GCGCCGTTGC GCACGCAGAT CGACGCCATC GATAACCAGC TTCTTTCGCT CCTCTCCGAT CGCGCCAAGG TGGCGCAGGA AGTGGGCGAG GTGAAGAAGC GCTATTCGTC GCCGGCATTC CGGCCGGATC GCGAACTGCA GGTCATTCGC AAGATGCAGT CGGGCAATCC GGGGCCGCTG CACGACGAGA GCATCGCCGC CATCTGGCGC GAGGTGATGT CGGCGTGCCG TGGCCTGGAA CAGGCGCTGC GGATCGGTTA CCTCGGCCCG GCGGGTACGT TTTCGGAGCA GGCGGTGATC GCGCATTTCG GACACGAGAT CCAGCCGATG CCGTGCCCGA GCATCGACGA AGTGTTTCGC GCGGCGGAGT CCGGCACGGT CGATTGCGGC GTGGTGCCGG TCGAAAATTC GACGGAAGGC GTGGTGTCGC GCACGCTCGA TCTGTTCTTG CAGACGTCGC TGAAGATCAG CGGCGAGATT GCGCTGCGGG TGCACCATAA CTTGCTGCAC AAGACGGGCG ACATGTCGCA GGTGAAGGTG GTGCGTGCGC ATGCGCAGGC GCTGGCGCAG TGCCAACGGT GGTTGAACAC GAACTATCCG CATCTCCCGC GCGAGGCTGT GTCGAGCAAC GCCGAGGCCG CGCGCATGGC TGGCGAGGAC GAAACGGTCG CCGCGCTGGC AAGCGTGCAG GCAGCCAACC GCTACGGCCT GCACGTGGTG CGTGCCAATG TGGAAGACGA TCCGCACAAC CGCACGCGCT TTGTCGTGAT CGGCAATTAC GAGACGGAGC CGAGCGGACG CGATCAGACG TCGTTGATTT TGTCGGTGCC GAACGAGGCC GGCGCCGTCT ACAAGTTGCT GGCCCCGTTG GCCGAGAACG GCGTGTCGAT GTGTCGTTTC GAGTCGCGTC CGGCGCGCAG CGGCGCCTGG GAGTACTACT TCTACGTCGA CGTGGAAGGC CATCAGCGCG ACCCGCAAGT GGCGCGCGCG CTGGAAAAGC TGCGTCATGA CGCGGCGTAT TTCAAAGTGT TGGGGTCCTA TCCCTCGGCA CATTGA
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Protein sequence | MTSQSDDTKQ NKDAALAAEL APLRTQIDAI DNQLLSLLSD RAKVAQEVGE VKKRYSSPAF RPDRELQVIR KMQSGNPGPL HDESIAAIWR EVMSACRGLE QALRIGYLGP AGTFSEQAVI AHFGHEIQPM PCPSIDEVFR AAESGTVDCG VVPVENSTEG VVSRTLDLFL QTSLKISGEI ALRVHHNLLH KTGDMSQVKV VRAHAQALAQ CQRWLNTNYP HLPREAVSSN AEAARMAGED ETVAALASVQ AANRYGLHVV RANVEDDPHN RTRFVVIGNY ETEPSGRDQT SLILSVPNEA GAVYKLLAPL AENGVSMCRF ESRPARSGAW EYYFYVDVEG HQRDPQVARA LEKLRHDAAY FKVLGSYPSA H
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