Gene Rpic12D_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0843 
Symbol 
ID8018474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp883926 
End bp884486 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content58% 
IMG OID644829622 
Productsignal peptide protein 
Protein accessionYP_002980816 
Protein GI241662456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.393902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.139506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGA GTCTCAAACT CAAACATCTG ATCGTGGTGG CCGGTTTCGC TCCGCTGTTT 
GCATTCGCGC AGGCTGGCGA CGCTGACAAG ACGGCAGCCA TCAAGGACCT GCTGACGACG
ATGAACGTCG ACGCAGCCAT CAAGGGTCAG GGTGAAGTGC TGGCCAACGG CGCAAAGCAG
GAAGCCCCGC TGGTGCTGGA GCAGGCACTG GTGGAGAACA AGACTCTGAA CGACAAGCAG
AAGCAAGCGG CTGTCGACAA GCTGAAGAAG AATGGCGCTG TGCAGCGCAT GACCGACGGC
GCTGGCAAGG ACTTCGACAC GGAAGCCTTC CGCAAGGACG CCCTGCAAGC CCACTATGAC
TCGCTGGGCA AGTACTACTC GACCCAGGAA ATCAAGGACC TGACCACGTT CCTGAAGACG
CCCAGCGGCC AGAAGTTCAT GGCCAACCAA GGCAAGGCCA TGCAGGAAGT GTGGGGCAAT
GTGATGCAGA AGTACGGTCC GCAAGTCGGC AAGAAGATGC GCGACATGGC TGACAAGGAA
GTCGCTGCTG CTGCGAAGTA A
 
Protein sequence
MHKSLKLKHL IVVAGFAPLF AFAQAGDADK TAAIKDLLTT MNVDAAIKGQ GEVLANGAKQ 
EAPLVLEQAL VENKTLNDKQ KQAAVDKLKK NGAVQRMTDG AGKDFDTEAF RKDALQAHYD
SLGKYYSTQE IKDLTTFLKT PSGQKFMANQ GKAMQEVWGN VMQKYGPQVG KKMRDMADKE
VAAAAK