| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0842 |
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| Symbol | |
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| ID | 8018473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 881128 |
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| End bp | 883797 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829621 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_002980815 |
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| Protein GI | 241662455 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.18082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.146748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAT TCGCCAAAGA GACACTCCCG GTATCGCTCG AAGAAGAAAT GCGCAGTTCG
TACCTCGCTT ACGCCATGAG CGTGATCGTG GGCCGCGCGC TTCCCGATGT GCGGGATGGT
CTCAAGCCGG TGCATCGCCG TGCGCTGTAC TCAATGCACG AGCTGAACAA CGACTGGAAT
CGCCCCTATA AGAAGTCCGC CCGTATCGTC GGGGATGTGA TCGGTAAGTA TCACCCCCAC
GGCGACACTG CTGTATACGA CACCATCGTG CGGATGGCGC AGAACTTCTC GCTGCGCTAC
ATGCTGGTCG ACGGCCAAGG CAACTTCGGC TCGGTCGACG GCGACAACGC CGCGGCGATG
CGTTACACCG AAATCCGCCT GTCGAAGATT GCCCACGAGC TGCTGGCAGA CCTCGACAAG
GAAACCGTCA ATTTTGAGCC GAACTACGAC GGCTCCGAAA CTGAACCGTC CGTTCTGCCG
GCGCGCATTC CCAACTTGCT GATCAACGGT TCGTCCGGGA TTGCGGTGGG GATGGCGACA
AACATTCCGC CGCACAACCT CAATGAGGTG GTTGATGGCT GCTTGCACTT GCTGCGCAAC
CCGGAAGCGA CGGTCGACGA GCTGATCGAA CTGATTCCGG CGCCGGATTT CCCGACGGCG
GGCATTATCT ATGGCATTTC GGGTGTGCGT GAAGGCTATC GGACCGGCCG CGGCCGTGTG
GTGATGCGCG CCAAGACGCA CTTCGAAGAT ATCGACCGCG GCCAGCGCCA GGCGATCATC
GTCGACGAAC TGCCGTATCA AGTTAACAAG CGCACGCTGC TCGAGCGTAT TGCTGAGCTG
GTCACCGAAA AGCGTATCGA AGGCATTTCC GACATTCGCG ACGAATCGGA CAAGTCCGGC
ATGCGCGTGG TGATCGAACT GAAGCGCGGC GAGGTGCCGG AGGTTGTGCT CAACAACCTC
TATAAGAATA CGCAGCTGCA AGACACGTTC GGCATGAACA TGGTGGCGCT GGTCGACGGC
CAGCCGCGCC TGCTGAACCT GCGCCAGATG CTGGAGTGCT TCCTGCTGCA TCGCCGCGAG
GTGGTGACGC GTCGCACCGT GTTCGACCTG CGCAAGGCGC GCGAACGTGG TCACATCCTG
GAAGGTCTGG CTGTTGCGCT TGCCAACATC GACGAATTCA TCGCCATCAT CAAGGCTGCG
CCGACACCGC CGGTTGCCAA GGCTGAGCTG ATGAACCGCA GTTGGGATTC GGGCCTCGTC
CGCGACATGC TCGTTCGCGC CGAGAGCGAA ACCTCTGGCG GTGGCGCCGC GTATCGGCCG
GAAGGTCTGC TCCCGGTGTT TGGTATGCAG GGCGACGGCT TGTACAGGCT GTCGGATACG
CAAGCGCAGG AAATTCTGCA GATGCGCCTG CAACGCCTCA CCGGGCTGGA GCAAGACAAA
ATCGTCCAGG AATACCGCGA GGTGATGGCG CAGATCGCCG ATCTGTTGGA CATCCTTGCG
AAGCCGGAGC GCATTACCGC CATCATCGTC GAGGAACTGA CCGCGATCCG CGCGGAATTC
GGCGATGAGC GTCGCTCGCA GATCGAGCAC AATGCGACCG AGTTGGATAC AGAAGACCTC
ATTACGCCAC AAGATCTGGT GGTGACGCTG TCCCACAGCG GCTACATGAA GAGCCAGCCG
ATTTCCGAAT ACCGGGCGCA AAAGCGTGGC GGCCGCGGCA AGCAAGCTGC GGCGACGAAG
GAAGACGATT GGATCGACAC GCTATTCGTC GCCAACACAC ACGATTACAT CCTCTGCTTC
TCGAACCGCG GCCGTCTGTA TTGGCTGAAG GTGTGGGAGG TGCCACAGGG CAGCCGTAAC
TCGCGCGGTC GCCCGATCGT CAATATGTTC CCGCTGTCGC CGGGCGAGAA GATCAACGTG
ATCCTGCCGG TGAAGCAGTT CGACGAGCAG CACTTCGTCT TTATGGCCAC CTCCAAGGGG
ACGGTCAAGA AGACGGCGCT CACCGAATTC TCGAATCCGC GCAAGGCCGG CATTATCGCG
GTCGATTTGG ATGAGGGCGA TTTCCTGATC GGCGCGGACA TTACCGATGG TCAGCATGAT
GTGATGCTGT TCTCCGACGC CGGAAAGGCG GTGCGCTTCG ATGAGAACGA CGTGCGCCCG
ATGGGTCGTC AGGCGCGTGG TGTGCGCGGT ATGAATCTCG AAGAGAACCA GCAGGTGATT
GCCATGTTGG TCGCGCCGGC AGAAACCGCG GGTGAAGGGG CTCAATCCGG TGCGGGTAGC
GTGCTGACCG CCACCGAGAA CGGCTACGGT AAGCGCACAC CGATCTCGGA GTACACCCGG
CACGGCCGCG GCACGAAGGG CATGATCGCC ATCCAGACCT CCGAGCGTAA CGGCAAGGTC
GTGGCCGCCG CGCTGGTGGC GCCTGAAGAC GAGATCATGC TAATCACGAC GGGCGGGGTG
CTGATCCGCA CGCGTGTGGA CGAGATCCGT GAAATGGGCC GCGCTACGCA GGGCGTCACG
CTCATCTCGG TGGGTGAGGG CAACAAGCTG TCCGGACTGC AACGTGTGAT GGAGTCCGAT
GCTGAAGGCG CGGATGCTGT TGAAGGCGCC GATGCGGCGG ATGCCGCCCC GGGTGCCGAT
GCACAGTCGG ATGACAGCAG CGAGACATAA
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| Protein sequence | MDQFAKETLP VSLEEEMRSS YLAYAMSVIV GRALPDVRDG LKPVHRRALY SMHELNNDWN
RPYKKSARIV GDVIGKYHPH GDTAVYDTIV RMAQNFSLRY MLVDGQGNFG SVDGDNAAAM
RYTEIRLSKI AHELLADLDK ETVNFEPNYD GSETEPSVLP ARIPNLLING SSGIAVGMAT
NIPPHNLNEV VDGCLHLLRN PEATVDELIE LIPAPDFPTA GIIYGISGVR EGYRTGRGRV
VMRAKTHFED IDRGQRQAII VDELPYQVNK RTLLERIAEL VTEKRIEGIS DIRDESDKSG
MRVVIELKRG EVPEVVLNNL YKNTQLQDTF GMNMVALVDG QPRLLNLRQM LECFLLHRRE
VVTRRTVFDL RKARERGHIL EGLAVALANI DEFIAIIKAA PTPPVAKAEL MNRSWDSGLV
RDMLVRAESE TSGGGAAYRP EGLLPVFGMQ GDGLYRLSDT QAQEILQMRL QRLTGLEQDK
IVQEYREVMA QIADLLDILA KPERITAIIV EELTAIRAEF GDERRSQIEH NATELDTEDL
ITPQDLVVTL SHSGYMKSQP ISEYRAQKRG GRGKQAAATK EDDWIDTLFV ANTHDYILCF
SNRGRLYWLK VWEVPQGSRN SRGRPIVNMF PLSPGEKINV ILPVKQFDEQ HFVFMATSKG
TVKKTALTEF SNPRKAGIIA VDLDEGDFLI GADITDGQHD VMLFSDAGKA VRFDENDVRP
MGRQARGVRG MNLEENQQVI AMLVAPAETA GEGAQSGAGS VLTATENGYG KRTPISEYTR
HGRGTKGMIA IQTSERNGKV VAAALVAPED EIMLITTGGV LIRTRVDEIR EMGRATQGVT
LISVGEGNKL SGLQRVMESD AEGADAVEGA DAADAAPGAD AQSDDSSET
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