Gene Rpic12D_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0840 
Symbol 
ID8018471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp879353 
End bp879859 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID644829619 
Product17 kDa surface antigen 
Protein accessionYP_002980813 
Protein GI241662453 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0572265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA AACAAATTCT GATAGCAGCG GGTGTTGTGG GCCTGACGGT CCTGGCTGGA 
TGCGCCGCGC CGGGTTACGG CGGTGGCTAT AACGGCGGGT ATTCTCAACA GCCTCCGGCG
TACGGCCAGC AACCGGCTTA CAGCGGGCAG CCGCAGCAAA CGGGCGCTCT TTATGGCCGC
GTGGAATCGA TCCAGCCGAT GCAAGCCCCG GCCAATAGCC CGGGCATCTT GGGCACGATT
ATCGGTGGTG TGGCCGGCGG TATCCTCGGT CACCAAGTGG GCGGTGGTAC GGGCAACACC
GTTGCGACCA TTGGTGGCGC AGCGCTTGGC GCCTATGCAG GCAACCAGGT TGAACAGCGC
GCCGGCGCCG GTGGGCAAAC CGTGTACCGC ATCAGCGTGC GCCTGGACGA TGGCCGCGTC
GCGACCGTGA CACAGCGGAA TCCGAACAAC CTGCGTGTTG GCGATCGCGC CATGGTCGCC
AACGATCAGG CGACACCTTC TTATTAG
 
Protein sequence
MKSKQILIAA GVVGLTVLAG CAAPGYGGGY NGGYSQQPPA YGQQPAYSGQ PQQTGALYGR 
VESIQPMQAP ANSPGILGTI IGGVAGGILG HQVGGGTGNT VATIGGAALG AYAGNQVEQR
AGAGGQTVYR ISVRLDDGRV ATVTQRNPNN LRVGDRAMVA NDQATPSY