Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0840 |
Symbol | |
ID | 8018471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 879353 |
End bp | 879859 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829619 |
Product | 17 kDa surface antigen |
Protein accession | YP_002980813 |
Protein GI | 241662453 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0572265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA AACAAATTCT GATAGCAGCG GGTGTTGTGG GCCTGACGGT CCTGGCTGGA TGCGCCGCGC CGGGTTACGG CGGTGGCTAT AACGGCGGGT ATTCTCAACA GCCTCCGGCG TACGGCCAGC AACCGGCTTA CAGCGGGCAG CCGCAGCAAA CGGGCGCTCT TTATGGCCGC GTGGAATCGA TCCAGCCGAT GCAAGCCCCG GCCAATAGCC CGGGCATCTT GGGCACGATT ATCGGTGGTG TGGCCGGCGG TATCCTCGGT CACCAAGTGG GCGGTGGTAC GGGCAACACC GTTGCGACCA TTGGTGGCGC AGCGCTTGGC GCCTATGCAG GCAACCAGGT TGAACAGCGC GCCGGCGCCG GTGGGCAAAC CGTGTACCGC ATCAGCGTGC GCCTGGACGA TGGCCGCGTC GCGACCGTGA CACAGCGGAA TCCGAACAAC CTGCGTGTTG GCGATCGCGC CATGGTCGCC AACGATCAGG CGACACCTTC TTATTAG
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Protein sequence | MKSKQILIAA GVVGLTVLAG CAAPGYGGGY NGGYSQQPPA YGQQPAYSGQ PQQTGALYGR VESIQPMQAP ANSPGILGTI IGGVAGGILG HQVGGGTGNT VATIGGAALG AYAGNQVEQR AGAGGQTVYR ISVRLDDGRV ATVTQRNPNN LRVGDRAMVA NDQATPSY
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