Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0839 |
Symbol | |
ID | 8018470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 878477 |
End bp | 879193 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829618 |
Product | 3-demethylubiquinone-9 3-methyltransferase |
Protein accession | YP_002980812 |
Protein GI | 241662452 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.761497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.099255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCA CTCACGCGAA CGCCGATCCC GGCGAACTCG AAAAATTCAG TGAACTCGCC CACCGCTGGT GGGACCCGAA CAGCGAGTTC AAACCCTTGC ACGAAATCAA CCCGCTGCGG CTTGACTGGA TTCAGTCCAT CACGCCGCTG GCAGGCAAAC GCATCGTCGA CGTGGGCTGC GGCGGCGGCA TCCTCTCAGA GAGCATGGCG CGTGCCGGGG CCATCGTCAA AGGCATCGAT CTCTCCCGCA AAGCATTGCG TGTTGCCGAC CTGCATAGCC TCGAGGCGGG CGTTACCGTC GATTACGAGG AGATCGCCGC AGAAGCGTTG GCCGCACGCG AGCCGGGCAG CTTCGATGTC GTCACTTGCA TGGAGATGCT CGAACATGTG CCTGATCCGG CGTCGGTTGT GCGCGCTTGC GCGACGCTGG TCAAACCGGG TGGATACGTC TTTTTCTCCA CCATCCACCG GAATGCCAAG GCGTATCTGC TGGCCGTCAT TGGCGCGGAA TATGTCCTCA ACATGCTGCC ACGCGGCACG CATGATTACG CTAAGTTCAT CCGCCCGTCA GAGCTGAGCG CGTTCGTACG CGCGGCCGGC CTTCAGGCGC AAGAGATGCG CGGGCTGGAA TACAACCCCA TCACCGCCCG CTACGCTCTT ACGCAGGACA CGAGCGTCAA CTACCTGATG GCGACGCGCC GTCCGGTCGA GGCATGA
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Protein sequence | MTTTHANADP GELEKFSELA HRWWDPNSEF KPLHEINPLR LDWIQSITPL AGKRIVDVGC GGGILSESMA RAGAIVKGID LSRKALRVAD LHSLEAGVTV DYEEIAAEAL AAREPGSFDV VTCMEMLEHV PDPASVVRAC ATLVKPGGYV FFSTIHRNAK AYLLAVIGAE YVLNMLPRGT HDYAKFIRPS ELSAFVRAAG LQAQEMRGLE YNPITARYAL TQDTSVNYLM ATRRPVEA
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