| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0832 |
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| Symbol | |
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| ID | 8018462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 867245 |
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| End bp | 869806 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644829611 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_002980805 |
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| Protein GI | 241662445 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.646384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.17108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACCT GCCAGACGAC CAAAGCGTTC TCCAGAAAGG CCGTTGGGAA AGCGGCTCCT
GTACGCCTGA GCACAACGCC GCTCTACCTG GCCGTGTGTC TTGCGATGAT GAACAGCGCG
CGCGCCACCG AAGGGGAGAC GCTCGTCGCA CAGGTGGATC CAACGCTCCT CGCATTCAAT
ACGAGTTTCC TGAACGGCCA AGGACGGCCA GCGGACCTGA GCGCCGTACT GAGTTCGGGC
AGCAGCGTGC CGCCCGGAAA CTATCGGGTG GAGGTGGAGG TCAACGGTAA TCTGGTCGGC
CGTCGCGACA TCGATTTCTA CCAAGACACC GACAAGGCCA AGCTGCGCCC GTGCCTGACG
GCGAAGATGC TTCAGGACTT CGGTGTCAAC CTGAGCGCGA TCAACCCGCC GCTGGATGTC
AACAGCCAAG CCTGCCTTGA TCTGCCGCAC CTGCTGGATC AGGCATCGGT CGATTTCGAT
GCCGGCAGGC TGCAGCTCAA TCTGAGCATT CCGCAGGCCT TTCTTTCCCG CGCGGCGCGC
GGCTATATAG ACCCTGCGCT GTGGGACGAA GGGGTCACTG CCGGCTACGT CAACTACCAG
TTCAGCGGCA ACTACGGTCA CAGCCACATC GGCACTGACA GCAGCAGCTA CTTCGTTGGC
CTGCAGAACG GCGTGAATAT AGGTCGCTGG CGCCTGCGAA ACGAGTCCAC GCTCACCGGT
AGCAACAGCG GCCAGACGCG CTTCAAGAGC AACCGCACGC TCGTGCAGCG CGACGTCGAT
GCCATCAAGG GCCAGCTGAC GTTCGGCGAG CAGTATTCCG ACGCGACGTT GTTTGATAGC
GTGCGGTTTC GCGGTGTGCA AGTCACTTCT GACGATGCCA TGCTGCCCGA CAGCGAGCGC
GGCTATGCGC CGGTGGTGCG CGGTCAAGCA GCCACCAACG CGGTGGTCGA GGTGCGCCAG
AGCGGCTATG TGCTCTATCG GGCCAACGTG CCGCCTGGCC CGTTCCAGCT GACCGACATC
TTCCCGTCCG GCTCCAATGG CGATCTGGAG ATCACCGTCA TTGAAGCTGA CGGTAGCAAG
CGCGTCACGC ATCAGGCGTT CTCCAGCCTG CCGCTGATGC TGCGCAAGGG GCGCCTGAAG
TATAGCTTTG CAGCCGGCAA GTACGATGGG GACCAGGGCC CCGCGCCTAA TCTGGTCAGC
GGCTCGCTCG TCTATGGCCT GACCGACAAC AGCACGGTGG CGGGCGGCCT GCAAGTGTCG
AAAGACTTCC AGGCCTTGAA CGTGGGGGTC GGTACGAACA CGCCCGTCGG CGCCCTGTCG
GTGGACATCA CGCAGTCGAG CAGCCGCGCG CAGGGTAAGC GCGACACCGG ACAGAGTGTG
CGCATCTTGT ATGCCAAGAC TTTTACGCGC ACCAACACGA ACTTCACGCT CGCGGCCTAT
CGCTACTCGA CGTCGGGCTA TCGCACGTTT AACGACCACG TTAACGACCT GCATAACGCC
GATGGCGTGC AATCCGGCCG CAGCCGCTCG CGCGTCGACT TGACGACCAG CCAGGACCTA
GGCGGACCTG ATCGCAAGTA TGGCAGCGTC TACCTGAACG TCAGCCAGCA GACCTATTGG
AACCAGCCGG GCTCCAGCCG CAGCATCAGC GTCGGCTACG GCAACAACTG GAAACGGCTC
AGCTACAACC TGAGTCTCAG CCAGACGAAG GACAGCCGCT TTGGCAGCAA CGGCAGCAAT
ACGCAGGTCA TGCTCACGAT GTCGATCCCG CTGGGTGGCA AGCTGCAATC ACAGCGTGCT
TACACCAACG TCAGCAACGA CAGTAGCGGC GGCACAAACA TCCAGAGCGG TCTGAGTGGT
TTCATCAGCG AAAAGACGTC ATATGCCATG CAGGCCGGCT ATACCAGCAG CGGGCGTGGC
GCGACGGGCG GTGCAAGCAT TACACACGAT GCCGATGCTG GCCAGCTTTC AGCCAACATC
AATGTCGCAC GGGACTACCA ATCGGCCAGC ATGAATGCCA TGGGTGCCGT AGTGGTACAT
GGCGGCGGCG TCAACCTGAG CCGTACTGTC GGCGACACCT TTGCGCTCAT GAAAATGGAG
GGCCTCAAGG GCACGGACAT CCGCACCGAC GGTGGCATTC CGGTTGGTAG AAACGGCTAC
GCGGTGGTGA CCTACGCACA GCCTTACCGG CTGAGCGCTT TGCGTCCCGA CACGCATAAC
CTGGGCGCCG ACGTCGAGCT CGAAGACACC GTCAAGCAGG TCGTGCCGCG CCGCGGCGCC
ATCGTGCAGG CGACCTTTCG TGGCTACAGC GGTCGGCGTG CGCAGTTCAC TCTGCAACAG
ATCGACGGCA AACCGGTGCC GTTTGGCGCC AGCGTGCAAG ACGCGCAAAC CGGCAAACAG
TTGGGCATTG CGGACCCGAA TGGCAATGCG TTTGTGCTGC TCAACCAGGA GCAGGGCACG
TTGGTTGTGA AATGGAAAGA AGGCCAATGC CAGGCACCCT ATGCGTTGCC GAAAGCAGAA
GCTGGCCGGA ACTACCAGCG GCAGACGTTG CGTTGTAGAT AG
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| Protein sequence | MSTCQTTKAF SRKAVGKAAP VRLSTTPLYL AVCLAMMNSA RATEGETLVA QVDPTLLAFN
TSFLNGQGRP ADLSAVLSSG SSVPPGNYRV EVEVNGNLVG RRDIDFYQDT DKAKLRPCLT
AKMLQDFGVN LSAINPPLDV NSQACLDLPH LLDQASVDFD AGRLQLNLSI PQAFLSRAAR
GYIDPALWDE GVTAGYVNYQ FSGNYGHSHI GTDSSSYFVG LQNGVNIGRW RLRNESTLTG
SNSGQTRFKS NRTLVQRDVD AIKGQLTFGE QYSDATLFDS VRFRGVQVTS DDAMLPDSER
GYAPVVRGQA ATNAVVEVRQ SGYVLYRANV PPGPFQLTDI FPSGSNGDLE ITVIEADGSK
RVTHQAFSSL PLMLRKGRLK YSFAAGKYDG DQGPAPNLVS GSLVYGLTDN STVAGGLQVS
KDFQALNVGV GTNTPVGALS VDITQSSSRA QGKRDTGQSV RILYAKTFTR TNTNFTLAAY
RYSTSGYRTF NDHVNDLHNA DGVQSGRSRS RVDLTTSQDL GGPDRKYGSV YLNVSQQTYW
NQPGSSRSIS VGYGNNWKRL SYNLSLSQTK DSRFGSNGSN TQVMLTMSIP LGGKLQSQRA
YTNVSNDSSG GTNIQSGLSG FISEKTSYAM QAGYTSSGRG ATGGASITHD ADAGQLSANI
NVARDYQSAS MNAMGAVVVH GGGVNLSRTV GDTFALMKME GLKGTDIRTD GGIPVGRNGY
AVVTYAQPYR LSALRPDTHN LGADVELEDT VKQVVPRRGA IVQATFRGYS GRRAQFTLQQ
IDGKPVPFGA SVQDAQTGKQ LGIADPNGNA FVLLNQEQGT LVVKWKEGQC QAPYALPKAE
AGRNYQRQTL RCR
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