| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0828 |
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| Symbol | |
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| ID | 8018458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 860250 |
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| End bp | 862706 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829607 |
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| Product | Endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_002980801 |
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| Protein GI | 241662441 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.182782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC ATTTCCTCCT TGCCGCCGTG CTGTCCGTGG CGTTGCCTGC TCAAGCCGAG
CTTCTCATCA GCGAGTACGT AGAAGGCAGC TCGAACAACA AGGCCATCGA AATCTACAAC
CCGGACGGCG CCGAAGCCGA TCTGTCGGTC TACAAGATCG AGCAGTACAA CAATGGCGCC
AGCACGCCCA CCGCGTCGTT TGCGCTCTCG GGCAAGCTGG CGCCAGGCGC CGTCCATGTG
ATGGCCCACA GCACACTGGC CAGCGTGCTC GGCAGCCGCG TCAACCAGAC TGCGGCGTTC
TCCTTCAATG GCGACGATGC GCTGACGCTC ACGCGTTCCG GCGTGGTTGT CGACCGCATC
GGCCAGGTTG GCTATCAACC GCCGTCCGGC TTCTGGGGTA CAGCCAGCGC CGGCACCAAG
GACCACACGC TGCGCCGCCA AGGCACGGTG AAGGCGGGCG ACACGGACAG CACAGCTGCC
TTCAATCCAT CCCTTCAGTG GGATGCCTTC AATATCGACG ACTTCTCCGA CCTTGGCCTG
TACAACGGGC AGGGCACCGT CACGCCACCA CCCGCCGTTG CGATGTGCGG CGCGCCGGCA
ACGCACCTTG CGGATGTGCA GGGCGCCGGG GCCACTTCGC CGCTGGTCGG CCTGAACGTC
GAGATCGAAG CCGTCGTGAC CGCCGACTAT AGTGGCGCCA CCGGCTTTAA CGGCTTCTTC
GTGCAACAAC CCGACGCGCA GCGCCGCCGG TTGTCTGGCG TGTCGGAAGG CCTGTTCGTC
TATGCACCGG GCGTCAGCGC CCGCGCTGGT GACCTCGTCC ACCTGGTCGG CAAGGTCGAG
GAGAAGTACG GCCAGACGCA ACTGACGCTG GCCACCGGCG GCATCGCAAG CTGTGCCAGC
GGCAACCGCG TGACGCCGGT CGACGTGACA TTGCCCGTGG CCGATGCCAA GGCGTTGTCG
GCGTATGAAG GGATGCTCGT GCGCCTGCCG CAGACGCTGA CGGTGAGCGA AACGTACGAG
CTTGGGCGCT ATGGCAGCGT CCTACTTAGC AGCGGGCGCC TGCCGTTGCC CACAAACGTT
GCGCCTCCCG TGAACGGGGC GGCAGCGCAG GCCGTGGCCA ATGCGCTGAA CCGCATCGTG
CTCGACGATG GCTCCAATCA ACAGAATCCG GGCACCGTTC GCTATCCGGC GCCGGGCTTG
TCGGCCGCGA ACCCCATGCG CGCCGGCTAC ACGGTGAGCG GCGTGCAGGG CGTGCTGGAA
ATGCGCTACA ACGCCTGGCG CCTGCAGCCC GTGCCGGGTG CGGCCGCGCC GGCTTTCAAT
GCTGCTGCGA ACCCGCGTGC GGGTGCCCCT GCGCGCCACG CTCAGGCCGA TGTGCGCGTC
GCTTCGTTCA ACGTGCTGAA CTACTTCAAC GGAGACGGCA AAGGGGTTGG CTTTGATGAT
CCAGCCAATC GAGGTGCCAA GACACGGGCC GAGTTCGAAC GCCAGGAAGC CAAGATCGTC
GCCGCCATCC GCGACCTCAA TGCCGACGTG GTCGGCCTGA TGGAAATCGA GAACGACGGC
TACGGCGAGC TCAGCGCCAT CCGCCGCCTG ACGACCCAGC TTGGCGCCGA CTGGCGCTAT
GTCGACCCGG GCATACCGAA GCTCGGCGGC GATGCAATCA CGGTGGCAAT CATCTACAAC
GGCCGCACAG TGGAGCCCGT CGGCACGCCG GCCACGCTTG CCATCGACGA CAAGAACCGC
CAGCCGCTCG CGCGCAGCTT CCGACGCATC GGCGGCACGC AGAACTTCAC CGTGGTCGTC
AATCACCTGA AGTCCAAGGG CTGTTCTGGT GCGAGCGGCA AGGACGCCGA CCAAGGCGAT
GGCCAAAGCT GCTGGAACCC CACCCGCGTC CGCGCTGCCG GCCTGATCGC CGACTGGCTG
GCGATCTCGC CGACCGGCGT GGCGGACATC GGCAAGCTCC TGATCGGCGA CCTCAACAGC
TATGCCAAGG AAGACCCCGT CGTGCTGTTC GCCGACAAAG GCTATGCCGA CATGGTGGCG
AAGTTCGTCG GCACGGATGC GTACAGCTAC GTCTATGGCG GCGAAGCCGG CTACATCGAT
CATGCGCTCG CCACCTCCGG CCTGGCCGAG CGCGTGCGCG CCGTGCACGA GTGGCACATC
AACGCCGATG AGCCGATTGC GCTGGAATAC TCGTTCGCCC ACAAGAGCGC CGAACAGCAG
CAGACGTTCT ACGCGCCGGA CGCCTACCGC TCGTCGGACC ACGATCCGGT GCTGGTCGAC
CTCGCGCTCA GCACGCAGAC GGCAGGCGGC GGCACGAATC CGGAAGCCGA TGCGGCGGCG
GGTGCGGCCA CGGGCAGCAC AGGGGTGGGG GGTGCCGGTG CGGTGGACCC GATCCTCGGG
CTCGCACTGG CCGCCGCTGC GGTAGCCCTC GCGCGACGTC GTGCGTCTCG GTTCTGA
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| Protein sequence | MRLHFLLAAV LSVALPAQAE LLISEYVEGS SNNKAIEIYN PDGAEADLSV YKIEQYNNGA
STPTASFALS GKLAPGAVHV MAHSTLASVL GSRVNQTAAF SFNGDDALTL TRSGVVVDRI
GQVGYQPPSG FWGTASAGTK DHTLRRQGTV KAGDTDSTAA FNPSLQWDAF NIDDFSDLGL
YNGQGTVTPP PAVAMCGAPA THLADVQGAG ATSPLVGLNV EIEAVVTADY SGATGFNGFF
VQQPDAQRRR LSGVSEGLFV YAPGVSARAG DLVHLVGKVE EKYGQTQLTL ATGGIASCAS
GNRVTPVDVT LPVADAKALS AYEGMLVRLP QTLTVSETYE LGRYGSVLLS SGRLPLPTNV
APPVNGAAAQ AVANALNRIV LDDGSNQQNP GTVRYPAPGL SAANPMRAGY TVSGVQGVLE
MRYNAWRLQP VPGAAAPAFN AAANPRAGAP ARHAQADVRV ASFNVLNYFN GDGKGVGFDD
PANRGAKTRA EFERQEAKIV AAIRDLNADV VGLMEIENDG YGELSAIRRL TTQLGADWRY
VDPGIPKLGG DAITVAIIYN GRTVEPVGTP ATLAIDDKNR QPLARSFRRI GGTQNFTVVV
NHLKSKGCSG ASGKDADQGD GQSCWNPTRV RAAGLIADWL AISPTGVADI GKLLIGDLNS
YAKEDPVVLF ADKGYADMVA KFVGTDAYSY VYGGEAGYID HALATSGLAE RVRAVHEWHI
NADEPIALEY SFAHKSAEQQ QTFYAPDAYR SSDHDPVLVD LALSTQTAGG GTNPEADAAA
GAATGSTGVG GAGAVDPILG LALAAAAVAL ARRRASRF
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