| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0827 |
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| Symbol | |
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| ID | 8018457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 859329 |
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| End bp | 859961 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829606 |
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| Product | Lysine exporter protein (LYSE/YGGA) |
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| Protein accession | YP_002980800 |
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| Protein GI | 241662440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.282435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACCC TCACCAACCT GCTCACCTTT GCCTTGGTTG CGCTCGGCAT GGTGCTGACG
CCGGGCCCGA ACATGATCTA CCTGATCTCG CGTTCGATCT GCCAGGGGCG CAACGCCGGG
CTGGTGTCGC TGGCGGGCAT CGCCACGGGC TTCGTTTTCT ACATGCTGTG CGCCGCATTC
GGCATCACCG CCTTGCTGAT GGCCGTGCCG TTTGCCTACG ATGCGCTGCG CTTTGGCGGC
GCGATCTATC TGCTGTACCT CGCCTGGCAG GCGGTGCGGC CCGGCGGCCG GGCGCCGTTC
CAGGTGCGTG AACTACCGGT GGACAGCCCG CGCAAGCTCT ACACGATGGG CTTGCTGACC
AGCCTGCTCA ATCCGAAGGT CGCAGTGCTC TATCTGTCGC TGCTGCCGCA GTTCATTGAG
CCGGCGCATG GCAGCGTGCT GGTGCAGTCG GTCTGCCTGG GGCTGACACA AATCTGCGTG
AGCGTGACCG TCAATTCGAT GATCGCGGCC ACGGCGGGCA GCATCGCGGC ATTCCTCTCG
CGCAAGCCGA GCTGGCTATC GGTTCAGCGC TACCTGATGG GCACCGTGCT GACGAGCCTG
GCGCTGCGCA TGGCCATGGA AGCGCGCAAG TAG
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| Protein sequence | MPTLTNLLTF ALVALGMVLT PGPNMIYLIS RSICQGRNAG LVSLAGIATG FVFYMLCAAF
GITALLMAVP FAYDALRFGG AIYLLYLAWQ AVRPGGRAPF QVRELPVDSP RKLYTMGLLT
SLLNPKVAVL YLSLLPQFIE PAHGSVLVQS VCLGLTQICV SVTVNSMIAA TAGSIAAFLS
RKPSWLSVQR YLMGTVLTSL ALRMAMEARK
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