Gene Rpic12D_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0825 
Symbol 
ID8018455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp858380 
End bp858961 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content63% 
IMG OID644829604 
ProductNUDIX hydrolase 
Protein accessionYP_002980798 
Protein GI241662438 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.184951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG ACTACCGCTT CTGCCCCCAA TGCGCTACGC CGCTCGTCGA GCAGCACAAC 
GCCGGCCGCC TGCGCATCGC GTGTCCGGTG CCGGACTGCG GCTTCGTCCA CTGGAACAAT
CCGTTGCCCG TCCTGGCGGC GGTTGTCGAA TATCGCGGGC AGATGTTTCT CGCGCGCAAT
GCGCTGTGGC CGGAGGGCAT GTTCGCGCTC GTCACGGGTT TTCTCGAACG CGACGAGACA
CCCGAAGAGG GCATCGCGCG CGAACTGAAG GAAGAGACGA ACCTCGACGC TCGCTCGATC
TCGCTGATCG GTGTGTATGA GTTCATCCGC AAAAATGAAC TGATCATTGC GTACCACGTG
GTGGCCGATG GCGAGATCGC GCTGTCGGAA GAGTTGGTTG AATACCGCCT GAAGCCGTTC
GAGAAAGTCC GCCCCTGGAC GGCCGGCACC GGTTATGCCG TCGCCGATTT TCTGACCGCG
CGCGGGCTGC CCGTCAACTA CATCGACATC CGCACCGGCG AACCGGCCGA GCCGCCGCCG
CGCCAGTGGC AACCCACCCG GCTCGTTACA ATCCCGGAAT GA
 
Protein sequence
MSFDYRFCPQ CATPLVEQHN AGRLRIACPV PDCGFVHWNN PLPVLAAVVE YRGQMFLARN 
ALWPEGMFAL VTGFLERDET PEEGIARELK EETNLDARSI SLIGVYEFIR KNELIIAYHV
VADGEIALSE ELVEYRLKPF EKVRPWTAGT GYAVADFLTA RGLPVNYIDI RTGEPAEPPP
RQWQPTRLVT IPE