Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0825 |
Symbol | |
ID | 8018455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 858380 |
End bp | 858961 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829604 |
Product | NUDIX hydrolase |
Protein accession | YP_002980798 |
Protein GI | 241662438 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.184951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCG ACTACCGCTT CTGCCCCCAA TGCGCTACGC CGCTCGTCGA GCAGCACAAC GCCGGCCGCC TGCGCATCGC GTGTCCGGTG CCGGACTGCG GCTTCGTCCA CTGGAACAAT CCGTTGCCCG TCCTGGCGGC GGTTGTCGAA TATCGCGGGC AGATGTTTCT CGCGCGCAAT GCGCTGTGGC CGGAGGGCAT GTTCGCGCTC GTCACGGGTT TTCTCGAACG CGACGAGACA CCCGAAGAGG GCATCGCGCG CGAACTGAAG GAAGAGACGA ACCTCGACGC TCGCTCGATC TCGCTGATCG GTGTGTATGA GTTCATCCGC AAAAATGAAC TGATCATTGC GTACCACGTG GTGGCCGATG GCGAGATCGC GCTGTCGGAA GAGTTGGTTG AATACCGCCT GAAGCCGTTC GAGAAAGTCC GCCCCTGGAC GGCCGGCACC GGTTATGCCG TCGCCGATTT TCTGACCGCG CGCGGGCTGC CCGTCAACTA CATCGACATC CGCACCGGCG AACCGGCCGA GCCGCCGCCG CGCCAGTGGC AACCCACCCG GCTCGTTACA ATCCCGGAAT GA
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Protein sequence | MSFDYRFCPQ CATPLVEQHN AGRLRIACPV PDCGFVHWNN PLPVLAAVVE YRGQMFLARN ALWPEGMFAL VTGFLERDET PEEGIARELK EETNLDARSI SLIGVYEFIR KNELIIAYHV VADGEIALSE ELVEYRLKPF EKVRPWTAGT GYAVADFLTA RGLPVNYIDI RTGEPAEPPP RQWQPTRLVT IPE
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