| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0817 |
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| Symbol | |
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| ID | 8018447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 849599 |
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| End bp | 851707 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829596 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_002980790 |
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| Protein GI | 241662430 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.682704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC ATCTCGCGGC TCGCGCCTTC TCGTGCGCGC TCGCCGCCAT TCCTCTTGCC
GTTTCCACAT TGGCGCATGC CGAAGCAGGC CAGCCGGCCG CAGGTAGTGC CACGCTCCAC
CTGAACGAGG CGACCGTCAC GGCAGGCAGC CAGCGGGGCT TTGCAGCCAG CACGGCACAG
GTCGGAGCGT TCCGCGGGAT GGCGTTGCGC GACATCCCTG CCACCGTGAA CGTGGTCACG
CGAGAGGCGC TCGACGCGCA GCAGGACACG TCGCTGTACG ACGCCCTGCG CAATACGGCC
GGCGTGACGC GCCAGCAGCT TTCAGGCGAA ACGTTCGACA ACCTCGCCAT CCGCGGCGTG
ACGCTGGAGA ACCGCACCAA TTTCCGCTTC AACGGCTCGA TGCCGATGGC TGCACTCACG
GCGATCCCGC TGGAAGACAA GGAACGCGTG GAGGTGCTCA AGGGTGTATC GGCGCTGTAT
TACGGCTACA CAACGCCGGG CGGCGTGGTG AACCTCGTGA CCAAGCGGGC CGGCAACACG
CCGGTGATGA CGCTGGGCAT GCAGTTCGAC AGCAACGGCA GTGTGGTCGG CACGCTGGAC
GTGGGGCGCC GTTTTGGTGA AGACAATCAA TATGGCCTGC GCTTCAACGC GGCGGGCGGT
TCGCTGCAGT CGCCGACGAG CGGCATTGAC GGTACGCGCC AGCTCGCCGC CGTGGCCTTC
GACTGGAAGG TCAGCAGCCG GCTCAGCCTG AAAGCCGACG TGGAATATTC GCGCAAGGTC
ATCACCGAAC AGTCGGTGGT GACGCTGCCC GCCGCAAAAA ATGGCGTCAT CACGCTGCCG
GCCATGCCCG ATCCGGCCAA ACGCATTGCG CCGGGCTGGG CCGATTTTGA CGGCAACAAC
ACCAACGCAT TGCTGCGTGC CGATTACACG CTCGCCGATG CATGGCTGCT GACGGTAGAG
GGTGGCGTGT CGGAGACGGC GCGGACGCGG GCGTTCTCCG AATTTCGGCT GACGAACACG
CTGACGGGCG CCGGCATGTT GTCGGGCCAG CGGCAGAGCG GTCGCTGGAA TACCAGCCAC
GTGCGGGTAG ACGTTTCCGG TACCGAGAAG ACGGGGTGGA TCACGCATGA CCTGACCTTT
GGCGTGGCGC GATCCGACAT GCGTCAGGCG GCCGTGTACT CGGACCGCTT CTCAGGCGCG
CAGAACCTGT ACAACCCGGT CGACCTTGGC TGGCTGCCGA CCACCGGCAC CGGCTTTACC
GCCGAGCAGC GCGCCGTAGA CAGCGGCGTC TACGCGCTGG ATCGCATGAC GCTGTCGGAG
CACTGGCAGG TGATCGCCGG ACTGCGCTAC ACGCGCTATA CCAGCGAGCA GGCGCCCAAC
CGTTATGAAG CCAGCAAGAC CACGCCGCTG GGGGCGGTCA TCTACAAGTT CACGCCGACG
CTGTCGGCGT ATGCGTCGTA CGCACAAGGC CTGGAAGCCG GAGCGCGCGC CCCAAATACG
GCCGCCAATG CCAATGTGGC CATGCCGCCC GCGCTGTCGG AGCAGAAGGA ACTCGGCCTG
CGTTACGAAA CACCGGCCGG CACACAGCTC GCCGCTGCCG TGTACGACAT CGACCGCGCG
GCGAGCTACA CCAACGACGC GAACATCTTC GTGCAGGACG GCCGCGAGCG GATTCGGGGT
ATCGAGCTGA CCGCGCAAGG CCGCGTCACC CAGGATTTGT CGCTGCTGGC CTCGGCCGGC
TGGACGGACG CGAAGTTCCG CGGCGTCGGC AACGGCCTCG ACGCAAAGAC GCCGGAAAAC
ACGCCGCGCA GCACCGCCAG CATCTTTGCC GAATACACGT TGCCGATGCT GCGTGCTGTC
TCGTTCAACG CGGGCGCCTA CTACCTCGGC CCACGGCCTG TGAACGACGC CAACCAAGCA
GAGCTGGGCG GCACGACGCT CTTCAGCGCA GGCGTGCACT ATGTGACGCG GATTTCGGGC
AAGCGCGCGA CGCTGCAATT CAATGTCGAC AACCTGACCG ACAAGCGTTA CTGGGCGGGC
GCCGGGAACA ATCGTCTGTC GATGGGGGCG CCGCGGCTGT TCAAGCTCGG CATGAAGATC
GATCTGTGA
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| Protein sequence | MNRHLAARAF SCALAAIPLA VSTLAHAEAG QPAAGSATLH LNEATVTAGS QRGFAASTAQ
VGAFRGMALR DIPATVNVVT REALDAQQDT SLYDALRNTA GVTRQQLSGE TFDNLAIRGV
TLENRTNFRF NGSMPMAALT AIPLEDKERV EVLKGVSALY YGYTTPGGVV NLVTKRAGNT
PVMTLGMQFD SNGSVVGTLD VGRRFGEDNQ YGLRFNAAGG SLQSPTSGID GTRQLAAVAF
DWKVSSRLSL KADVEYSRKV ITEQSVVTLP AAKNGVITLP AMPDPAKRIA PGWADFDGNN
TNALLRADYT LADAWLLTVE GGVSETARTR AFSEFRLTNT LTGAGMLSGQ RQSGRWNTSH
VRVDVSGTEK TGWITHDLTF GVARSDMRQA AVYSDRFSGA QNLYNPVDLG WLPTTGTGFT
AEQRAVDSGV YALDRMTLSE HWQVIAGLRY TRYTSEQAPN RYEASKTTPL GAVIYKFTPT
LSAYASYAQG LEAGARAPNT AANANVAMPP ALSEQKELGL RYETPAGTQL AAAVYDIDRA
ASYTNDANIF VQDGRERIRG IELTAQGRVT QDLSLLASAG WTDAKFRGVG NGLDAKTPEN
TPRSTASIFA EYTLPMLRAV SFNAGAYYLG PRPVNDANQA ELGGTTLFSA GVHYVTRISG
KRATLQFNVD NLTDKRYWAG AGNNRLSMGA PRLFKLGMKI DL
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