| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0810 |
|---|
| Symbol | |
|---|
| ID | 8018440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 840092 |
|---|
| End bp | 841594 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644829589 |
|---|
| Product | protein of unknown function DUF112 transmembrane |
|---|
| Protein accession | YP_002980783 |
|---|
| Protein GI | 241662423 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCT TTGCCAATCT CGCGCTCGGC TTCTCCACCG CGCTCTCCAT CCAGAACCTG
ATCTACGCGT TCATCGGCTG CGTGCTCGGT ACGTTGATTG GCGTGCTGCC AGGCCTGGGC
CCTATCGCCA CGATTGCGAT GCTGCTGCCG GCCACGTATG CGCTGCCGCC GGTGGCTGCG
CTCATCATGC TGGCCGGCAT TTACTACGGC GCGCAGTACG GCGGCTCCAC CACAGCCATC
CTCGTTAACC TGCCGGGCGA ATCGTCATCG GTGGTGACGA CCATCGACGG CTACCAGATG
GCACGGCGCG GGCGCGCGGG CGTGGCGCTG GCCACCGCGG GCCTCGGCTC GTTCTTCGCG
GGCTGCGTGG CCACGCTGGT GCTGGCGGCG TTTGCCACGC CGCTATCGGA ATTCGCGTTC
CACTTCGGGC CGGCGGAATA TTTCTCTTTG ATGGTGCTGG GCCTGATCGG CGCGGTCGTG
CTGGCGTCGG GCTCGCTGAT CAAGGCGATT GCGATGATCG TCCTGGGCCT GTTGCTTGGC
CTGGTCGGCA CCGATGTGAA TTCGGGCACC GCGCGTTATT CGTTTGACGT GCCGGAACTG
GCCGACGGGT TGAACTTCGT GTCGGTGGCG ATGGGCGTGT TCGGCTTTGC CGAGATCATC
GCCAACCTCG AACAGAAGGA GCATCGTGAA ACCTTTGTCG AGCACGTGCG TAACCTCTGG
CCCAGCCGCG AAGATTTCAA GCGCATGATC CCGGCCGTAC TGCGCGGCAC GGCGCTGGGC
TCGCTCCTGG GCATCCTGCC GGGCGGCGGC GCGACGCTGG CATCGTTCGC GTCGTACTCG
CTGGAGAAGA AAACCTCGAA GTATTCGAGT GAATTCGGCA AGGGCGCCAT CGAAGGCGTG
GCGGGCCCGG AATCGGCCAA CAATGCTGCG GCGCAGACGT CTTTCATCCC GCTGCTCACA
CTGGGCATTC CGCCCAACGC AGTGATGGCG CTGATGGTGG GCGCGATGAC CATCCACAAC
ATCCAGCCCG GCCCGCAGGT GATGACCAGC AACCCGGCGC TGTTCTGGGG CCTCATCGCC
TCGATGTGGA TCGGCAACCT GATGCTGATC GTGCTGAACC TGCCGATGAT CGGCGTGTGG
GTACGCCTGT TGAAGGTGCC GTATCGCTTC CTATATCCGG CCATCCTGGT GTTCTGCTGC
ATCGGCGTGT ATTCAGTGTC GAATACGACG TTCGATATCT TCCAGACAGC GCTGTTCGGA
TTGATCGGCT ACATGTTCGT CAAGCTGCGC TGCGAGCCAG CGCCCATGCT GCTCGGCTTC
GTGCTGGGGC CGATGATGGA AGAAAACTTC CGCCGCGCGC TGTTGCTGTC ACGCGGGGAT
TTCTCCACGT TCGTCTCGCG GCCGCTGTCG CTGGGGCTGC TGATTGCGGC GGGCATCCTC
GTCTTGCTGG TGGCGCTGCC CGCCATCAAC AGAAAACGCG TGGAAGCGTT CCAAGAAGAA
TAA
|
|---|
| Protein sequence | MDLFANLALG FSTALSIQNL IYAFIGCVLG TLIGVLPGLG PIATIAMLLP ATYALPPVAA
LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTTIDGYQM ARRGRAGVAL ATAGLGSFFA
GCVATLVLAA FATPLSEFAF HFGPAEYFSL MVLGLIGAVV LASGSLIKAI AMIVLGLLLG
LVGTDVNSGT ARYSFDVPEL ADGLNFVSVA MGVFGFAEII ANLEQKEHRE TFVEHVRNLW
PSREDFKRMI PAVLRGTALG SLLGILPGGG ATLASFASYS LEKKTSKYSS EFGKGAIEGV
AGPESANNAA AQTSFIPLLT LGIPPNAVMA LMVGAMTIHN IQPGPQVMTS NPALFWGLIA
SMWIGNLMLI VLNLPMIGVW VRLLKVPYRF LYPAILVFCC IGVYSVSNTT FDIFQTALFG
LIGYMFVKLR CEPAPMLLGF VLGPMMEENF RRALLLSRGD FSTFVSRPLS LGLLIAAGIL
VLLVALPAIN RKRVEAFQEE
|
|---|
| |