Gene Rpic12D_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0807 
Symbol 
ID8018437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp836026 
End bp837756 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content64% 
IMG OID644829586 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_002980780 
Protein GI241662420 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG ACAACGCCAC CGCCCCGACG TCCAACTTCC TGCGCCAGAT CATTGACGCC 
GACCTCGCGC AAGGCACCTA CGCCGATCGC AAGGACGCCA CTGGCCAGCC GATTCCGCCG
GTGGTCACGC GCTTTCCGCC GGAGCCCAAC GGTTACCTGC ACATCGGTCA CGCCAAGAGC
ATCTGGGTGA ACTTCGGCAT GGCCCGCGAT TACAACGGCC GCTGCCACCT GCGCTTCGAC
GACACGAACC CCGTCAAGGA AGACACCGAA TACGTCGATT CCATCATCGA CGCCGTGCAC
TGGCTCGGCT ACTCGTGGAG CGACGCCGGC GGCGAACACC TGTACTACGC CAGCGACTAC
TTCGAGCAGC TCTACGGCTT TGCCGAGGTG CTGATCCAGC GCGGCGTGGC CTACGTCGAC
AGCCAGAGCG CCGAGCAGAT CGCCGCCAAT CGGGGCGATT TCACCCGCCC GGGCACGCCA
TCGCCGTTCC GTGACCGCTC GGTGGACGAA AACCTGGCGC TGTTCCGCGA CATGCGCGCC
GGCAAGTACA AGGACGGCGA GCACGTGCTG CGCGCCAAGA TCGACATGGC CGCACCGAAC
ATCGTGATGC GCGACCCGGT GCTGTACCGC ATCCGCCATG CGCATCACCA CCGCACCCGC
GACGCGTGGT GCATCTACCC GATGTACGAC TTCACGCATT GCATTTCCGA TGCGCTGGAG
AACATCACGC ATTCGCTCTG CACGCTGGAG TTCGAGAACA ACCGCCCGCT GTATGACTGG
GTGCTCGACC ACCTGCGTGA TGCCGGCGTG CTGGCCGCCC CGCTGCCGCA TCAATACGAA
TTCGCGCGCC TGCATCTCAC CTACGCCATC ACCAGCAAGC GCAAGCTGCT GCAACTGGTG
ACGGAAAAGC GCGTCGACGG CTGGGACGAC CCGCGCATGC CGACGCTCGT TGGCATCCGC
CGCCGTGGCT ACACGCCCGA ATCGATCCAG CTGTTCTGCG AACGCGTGGG TGTGTCGAAG
GCCGACAGCT GGATCGACAT GAGCATCCTG GAAGGCGCCG TGCGCGACGA CCTCGACGCG
CGTGCGCCGC GCTCGGTGGC CGTGCTGGAC CCGGTCAAAC TGGTGCTCGA CAACGTGCCG
GCCGATTTCA ATGAGCCGTG CTCCGCACCC GTGCACCCGA AGCAACCTGA ACTGGGCCGC
CGCGAATTCC CGCTCACGCG TGAGCTGTGG ATCGAGCGCG AAGACTTTAC CGAGACGCCG
CCCAAGGGCT ACTTCCGCCT CTTCCCGGGC AACAAGGTAC GCCTGCGCTA CGGCTATGTG
ATCGAATGCA CCGGCTGCGA CAAGGATGCC GACGGCAACA TCACCGCCGT GCACGCCAAC
ATCATTCCGG ACACGAAGAG TGGCACGCCG GGTGCTGACA GCGTAAAGGT GAAGGGCAAC
ATCCACTGGG TGAGCGCCGC ACATGCGCTG GAAGCTGAAG TGCGCCTGTA CGACCGCCTG
TTCAGCGATC CGCAACCGGA TTCGGGCGAC AAGAACTTCC TGGATGCGCT CAACCCGGAT
TCCAAGAAGA TCGTCACGGC CTACCTGGAG CCGACGCTGG CAACGGCCAA GGCGGAAGAC
CGCTTCCAGT TCGAGCGCCA TGGCTACTTC GTGGCAGACC GCATCGACTC GCAGCCGGGC
AAGCCCGTGT TCAACCGCGT GGTCGGCCTG AAGGACAGCT GGGGCAAGTA A
 
Protein sequence
MSQDNATAPT SNFLRQIIDA DLAQGTYADR KDATGQPIPP VVTRFPPEPN GYLHIGHAKS 
IWVNFGMARD YNGRCHLRFD DTNPVKEDTE YVDSIIDAVH WLGYSWSDAG GEHLYYASDY
FEQLYGFAEV LIQRGVAYVD SQSAEQIAAN RGDFTRPGTP SPFRDRSVDE NLALFRDMRA
GKYKDGEHVL RAKIDMAAPN IVMRDPVLYR IRHAHHHRTR DAWCIYPMYD FTHCISDALE
NITHSLCTLE FENNRPLYDW VLDHLRDAGV LAAPLPHQYE FARLHLTYAI TSKRKLLQLV
TEKRVDGWDD PRMPTLVGIR RRGYTPESIQ LFCERVGVSK ADSWIDMSIL EGAVRDDLDA
RAPRSVAVLD PVKLVLDNVP ADFNEPCSAP VHPKQPELGR REFPLTRELW IEREDFTETP
PKGYFRLFPG NKVRLRYGYV IECTGCDKDA DGNITAVHAN IIPDTKSGTP GADSVKVKGN
IHWVSAAHAL EAEVRLYDRL FSDPQPDSGD KNFLDALNPD SKKIVTAYLE PTLATAKAED
RFQFERHGYF VADRIDSQPG KPVFNRVVGL KDSWGK