| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0801 |
|---|
| Symbol | |
|---|
| ID | 8018431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 829740 |
|---|
| End bp | 830291 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644829580 |
|---|
| Product | YaeQ family protein |
|---|
| Protein accession | YP_002980774 |
|---|
| Protein GI | 241662414 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.272933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.568339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGA AATCCACGAT CTACAAGGTC GATCTGCAGA TCGCCGACAT GGATCGCCAC
TACTACGCCA ACCACGCGCT GACCGTCGCC CGCCACCCGA GCGAGAACGA CGAACGCATG
ATGGTGCGCG TGCTCGCCTT CGCCCGCCAC GCCAGCGAAA CACTTGCCTT CACGCGCGGT
CTGTCGGAGC CCGACGAGCC CGAACTCTGG CAGCGCGACC TGACCGACGC CATCGAGCTG
TGGATCGACC TGGGCAACCC CGACGACACC CGCATCCGCA AGGCCAGCAA CCGCGCGGAG
CAGGTCGCCG TCTATACCTA TAGTGGCAAC GCGAGCCGCG TGTGGTGGCA ACAAACCGAG
ACCAAGATCA CGCGCTTTGC CAACGTGTCG GTGTACGAAG TCGCGGCGGA CACGGTGGCC
GCGCTGGCCG CCATGGTGGA ACGCACCATG CGTCTGCAAG TCACCATCCA GGATGGCGAC
ATCTGGATCG CCAACGACAC GGACAACGTC CACGTCCAGC TCGAAACCCT CAAGGCCGCA
ACCGCTGCCT GA
|
|---|
| Protein sequence | MALKSTIYKV DLQIADMDRH YYANHALTVA RHPSENDERM MVRVLAFARH ASETLAFTRG
LSEPDEPELW QRDLTDAIEL WIDLGNPDDT RIRKASNRAE QVAVYTYSGN ASRVWWQQTE
TKITRFANVS VYEVAADTVA ALAAMVERTM RLQVTIQDGD IWIANDTDNV HVQLETLKAA
TAA
|
|---|
| |