Gene Rpic12D_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0800 
Symbol 
ID8018430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp829345 
End bp829698 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content62% 
IMG OID644829579 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_002980773 
Protein GI241662413 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.429736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.563113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG AAACCACCGC AAGCGGCCTG CAATACGAAG ATGTCGTCGT CGGCGACGGC 
GCTGAAGCCA CGGCCGGCAA ATACGTCACC GTGCACTACA CCGGCTGGCT CTACGAAAAC
GGCCAGGCCG GCAAGAAATT CGATTCCAGC AAAGACCGTA ACGACCCCTT CGCCTTCCAC
CTGGGCGGCG GCATGGTCAT CAAGGGCTGG GACGAAGGCG TGCAAGGCAT GAAGGTTGGC
GGCACGCGCA AGCTGATCAT CCCGGCAGCC CTGGGCTACG GCGCACGCGG CGCCGGCGGC
GTGATCCCCC CGAACGCAAC ATTGCTTTTT GAAGTCGACC TGCTGGAAGT CTGA
 
Protein sequence
MTIETTASGL QYEDVVVGDG AEATAGKYVT VHYTGWLYEN GQAGKKFDSS KDRNDPFAFH 
LGGGMVIKGW DEGVQGMKVG GTRKLIIPAA LGYGARGAGG VIPPNATLLF EVDLLEV