Gene Rpic12D_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0799 
Symbol 
ID8018428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp828320 
End bp829069 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID644829577 
ProductChaC family protein 
Protein accessionYP_002980772 
Protein GI241662412 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.496231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.444522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA CCCGAGAGGA TCTCGAACAG AACCGGTTGC GCGCCGCCCT GGGTGATTCG 
CCCGTCGCGT CGTCGTTGCT GACCGAGGCT GCGCTGGAAG CGTCGCTTGC ATCGACGCTC
GCGCGGTTGT CGGCTGCGCA CGGCGACTGC CAGGACGCCT GGGTGTTCGG CTACGGCTCG
CTCATCTGGA ACCCGATGAT CTTCCACACC GAGGCCGCCC GCGCCACGGT GCACGGCTAT
CACCGCGGCT TCTACCTCTA TTCCCGCATC AATCGCGGCA CCTGGGACAA CCCGGGGCTC
GTACTCGGGC TGGACCGCGG CGGCAGTTGC CGAGGCGTCG CCTTCCGCGT ACCGCGCGAA
CGTGCCGAAC ATGAATTCCG CGTGCTCTGG CGCCGCGAAA TGCTGACTGG CGCGTACCTG
CCCCGCTGGC TGCCCACCGA GATCAACGGC CGACGCGTCC TGGCGCTGGC CTTTGTCATG
AACCGCGCGC ATGAAGCCTA TGCCGGCCGC CTGCCGGACG AGCGCGTGGT CGGCTGCCTG
CGCGAGGCGG TCGGACTGTA CGGCCCGGCA CGCGAATACC TGCAGCGCAC GCTGATCGGC
CTGGCCAGCA ACGGGCTGCA CGATCCGTAT CTGGACCGCC TGTGGTCGCG CCTGCAGGCG
ACCGACGCGG CAAACGGCCC CTGCGCCACG ACCGATGCAA CGGACGCAAC CTACACCGCG
CCGCTGCCCG ATCCCTATCT CAGCGCCTGA
 
Protein sequence
MAVTREDLEQ NRLRAALGDS PVASSLLTEA ALEASLASTL ARLSAAHGDC QDAWVFGYGS 
LIWNPMIFHT EAARATVHGY HRGFYLYSRI NRGTWDNPGL VLGLDRGGSC RGVAFRVPRE
RAEHEFRVLW RREMLTGAYL PRWLPTEING RRVLALAFVM NRAHEAYAGR LPDERVVGCL
REAVGLYGPA REYLQRTLIG LASNGLHDPY LDRLWSRLQA TDAANGPCAT TDATDATYTA
PLPDPYLSA