Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0799 |
Symbol | |
ID | 8018428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 828320 |
End bp | 829069 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644829577 |
Product | ChaC family protein |
Protein accession | YP_002980772 |
Protein GI | 241662412 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.496231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.444522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGTCA CCCGAGAGGA TCTCGAACAG AACCGGTTGC GCGCCGCCCT GGGTGATTCG CCCGTCGCGT CGTCGTTGCT GACCGAGGCT GCGCTGGAAG CGTCGCTTGC ATCGACGCTC GCGCGGTTGT CGGCTGCGCA CGGCGACTGC CAGGACGCCT GGGTGTTCGG CTACGGCTCG CTCATCTGGA ACCCGATGAT CTTCCACACC GAGGCCGCCC GCGCCACGGT GCACGGCTAT CACCGCGGCT TCTACCTCTA TTCCCGCATC AATCGCGGCA CCTGGGACAA CCCGGGGCTC GTACTCGGGC TGGACCGCGG CGGCAGTTGC CGAGGCGTCG CCTTCCGCGT ACCGCGCGAA CGTGCCGAAC ATGAATTCCG CGTGCTCTGG CGCCGCGAAA TGCTGACTGG CGCGTACCTG CCCCGCTGGC TGCCCACCGA GATCAACGGC CGACGCGTCC TGGCGCTGGC CTTTGTCATG AACCGCGCGC ATGAAGCCTA TGCCGGCCGC CTGCCGGACG AGCGCGTGGT CGGCTGCCTG CGCGAGGCGG TCGGACTGTA CGGCCCGGCA CGCGAATACC TGCAGCGCAC GCTGATCGGC CTGGCCAGCA ACGGGCTGCA CGATCCGTAT CTGGACCGCC TGTGGTCGCG CCTGCAGGCG ACCGACGCGG CAAACGGCCC CTGCGCCACG ACCGATGCAA CGGACGCAAC CTACACCGCG CCGCTGCCCG ATCCCTATCT CAGCGCCTGA
|
Protein sequence | MAVTREDLEQ NRLRAALGDS PVASSLLTEA ALEASLASTL ARLSAAHGDC QDAWVFGYGS LIWNPMIFHT EAARATVHGY HRGFYLYSRI NRGTWDNPGL VLGLDRGGSC RGVAFRVPRE RAEHEFRVLW RREMLTGAYL PRWLPTEING RRVLALAFVM NRAHEAYAGR LPDERVVGCL REAVGLYGPA REYLQRTLIG LASNGLHDPY LDRLWSRLQA TDAANGPCAT TDATDATYTA PLPDPYLSA
|
| |