Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0789 |
Symbol | |
ID | 8018418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 816895 |
End bp | 818517 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829567 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_002980762 |
Protein GI | 241662402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.211025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.372024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAAT CTGAACAAAC TCGCCAACAA GCCGATATCG TGGTGGTGGG CTCCGGCGTG GCCGGGGCGC TGGTGGCGTA CGAGCTGGCG CGCGCGGGCA AGTCAGTGCT GATGCTCGAA GCCGGCCCGC GCCTGCCGCG CTGGGAAATT GTAGAGCGCT TCCGCAACCA GGCCGACAAG ATGGATTTCA TGGCGCCGTA TCCATCGACG GCATGGGCGC CGCACCCGGA ATACGGGCCA CCCAACAACT ACCTCGTGCT CAAGGGTGAG CATCAGTTCA ACTCGCAGTA CATCCGGGCG GTGGGTGGCA CGACCTGGCA CTGGGCCGCA TCGACGTGGC GCTTCCTTCC GAACGATTTC AAGCTGCGCA GCGTGTACGG CATCGCGCGC GACTGGCCGA TCCAGTATCA GGATCTGGAG CGCTATTACG GCCTGGCCGA AGAGGCCCTC GGCGTCTGGG GACCGAACGA CGAAGACCTC GGCTCGCCGC GTAGCCAGCC TTATCCGATG ACGCCGCTTC CGCTCTCGTT CAATGAGCGC ACGATCAAGG AAGCGCTCAA TGCGCACGAC GCGAGCTTCC ACGTGGTGAC CGAACCCGTG GCGCGCAACA GCCGCCCGTA CGACGGCCGC CCGACCTGCT GCGGCAACAA CAACTGTATG CCGATCTGCC CGATCGGTGC GATGTACAAC GGCATCGTGC ATGTGGAGAA AGCCGAGCAG GCCGGCGCAC GGCTGATCGA GAACGCCGTG GTCTTCAAGC TCGAAGTCGG CCCCAACAAG CGCATCGTGG CGGCGCGGTA CAAGGATTCG AAAGGCGCCG AGCACCGCGT GGAAGGCAAG TGGTTCGTGC TGGCTGCCAA CGGCATCGAA ACGCCCAAGC TGATGCTGAT GTCGACCAGC CAGGATTTTC CGAAGGGCGT GGGCAACAGC TCCGACATGG TGGGGCGCAA CCTGATGGAC CATCCCGGCA CCGGCGTGAG CTTCTATGCC GACCGCAAGC TATGGCCGGG ACGCGGGCCG CAGGAAATGA CGTCGCTGAT CGGCTTTCGC GATGGGCCGT TTCGCGCCAC GCAGGCTGGC AAGAAGCTGC ACCTGTCGAA CATCTCGCGC ATCGAGCAGG AAACGCAGCG CATCTTCAAG GAAGGCAAGC TCATCAAGCC GGCCGACCTC GATGCACGCA TTCGCGACCA GGCCGCGCGC TACGTGCAGT TCGACAGCTT TCACGAGATC TTGCCGCTGC CCGAGAACCG CATCGTGCCG AGTGCGACGG AAGTGGACGC CATCGGCATT CCACGCCCCG AGATCACGTA CCACATTGAC GATTACGTCA AACGCAGCGC CGTGCATACG CGGGAGGTCT ACGCGACGGC AGCCCAGGTA ATGGGCGGCA CCAATGTCGA ATTCCACGAC GACTTCGCAC CCAACAATCA CATCACCGGC GCAACCATCA TGGGGGCCGA TCCGAAAGAC TCCGTGGTCG ACAAGGATTG CCGGACGTTC GACCATCCGA ATCTGTTCAT CAGCAGCAGT TCCACCATGC CGACGGTGGG CACCGTCAAC GTGACGCTGA CCATCGCGGC ACTGGCCCTG CGGATTGCCG ATCAACTGAA GCAGGAGGCG TGA
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Protein sequence | MAQSEQTRQQ ADIVVVGSGV AGALVAYELA RAGKSVLMLE AGPRLPRWEI VERFRNQADK MDFMAPYPST AWAPHPEYGP PNNYLVLKGE HQFNSQYIRA VGGTTWHWAA STWRFLPNDF KLRSVYGIAR DWPIQYQDLE RYYGLAEEAL GVWGPNDEDL GSPRSQPYPM TPLPLSFNER TIKEALNAHD ASFHVVTEPV ARNSRPYDGR PTCCGNNNCM PICPIGAMYN GIVHVEKAEQ AGARLIENAV VFKLEVGPNK RIVAARYKDS KGAEHRVEGK WFVLAANGIE TPKLMLMSTS QDFPKGVGNS SDMVGRNLMD HPGTGVSFYA DRKLWPGRGP QEMTSLIGFR DGPFRATQAG KKLHLSNISR IEQETQRIFK EGKLIKPADL DARIRDQAAR YVQFDSFHEI LPLPENRIVP SATEVDAIGI PRPEITYHID DYVKRSAVHT REVYATAAQV MGGTNVEFHD DFAPNNHITG ATIMGADPKD SVVDKDCRTF DHPNLFISSS STMPTVGTVN VTLTIAALAL RIADQLKQEA
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