Gene Rpic12D_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0784 
Symbol 
ID8018413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp812454 
End bp813041 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content62% 
IMG OID644829562 
Productmethionine sulfoxide reductase A 
Protein accessionYP_002980757 
Protein GI241662397 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.650631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.421282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC AACAACTTAA CCAAGACAAC GAACCTTCGA AAAGTGTCGA AATAGCGACA 
CTTGGGGGTG GTTGTTTTTG GTGCCTGGAA GCCGTGTTCC AGGAGGTGCA GGGGGTGCAG
AGCGTGGTGT CCGGCTACGC CGGCGGCCAC GTCGATCGTC CGAGCTACCG TGCCGTTTGC
AGCGGCAATA CCGGCCATGC TGAAGTGGTG GCCGTGAAGT TCGACCCCGC CGTGATCCCG
TATCGCGAGA TTCTCGACAT CTTCTTCGCC ATCCACGACC CCACCACGGT GGATCGCCAG
GGCAACGATG TCGGCCCGCA ATACCGTTCG GCCATCTTCG CGCAAACGCC CGAGCAACTG
GCGACGGCGC GCACGGCCAT CGCCGAGCTG GGCGCCAGCG ACATCTTTGA AGCGCCCATC
GTGACCGAAC TGGTGGATGC AGCTGACGGC AAGGTCACCT TCTGGCGTGC CGAGGACGAG
CACCAGAACT ACTTCCGCGA CCACCCGGCC CAGGGCTACT GCGCGTTCGT CATCTCGCCC
AAGGTGGCGA AATTCCGCAA GCAGTTCGCA CACCGCTTGC AGGGTTAG
 
Protein sequence
MENQQLNQDN EPSKSVEIAT LGGGCFWCLE AVFQEVQGVQ SVVSGYAGGH VDRPSYRAVC 
SGNTGHAEVV AVKFDPAVIP YREILDIFFA IHDPTTVDRQ GNDVGPQYRS AIFAQTPEQL
ATARTAIAEL GASDIFEAPI VTELVDAADG KVTFWRAEDE HQNYFRDHPA QGYCAFVISP
KVAKFRKQFA HRLQG