Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0780 |
Symbol | |
ID | 8018409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 808118 |
End bp | 808564 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644829558 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_002980753 |
Protein GI | 241662393 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0895418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.140055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCT TGAAGAATAA ATTGAAGCAG TTAGAAAATG GAAATTATGT AGACAATTCA GGAAACGAGA TCAAAGCAAC CGAATTTCTG AATGTCCTAA TACCAAAAAA ACTGAAATGG ACAAGAGGAG ATTATATCGT GGGCTTACAA GAGAGTTTTA TTCAACTATC AAAACTTGGT CTAACTGGCG AACAATGGAA TGTTTTGACC TACCTTATTG GCAAAACTGA TTTTGAGAAT TACATACACA TAACTCAAAA AGAAATCAGT GAACACCTTG GAATTAAACA ACAGAATGTA TCGAAGGCTC TAAAAGTGCT TGTCGATAAA GAAGTAATCA AGAAACTCAA ACAAGGAACT TCTAATTACT ATCTTTTCAA CCCCGAGATA ATTTACAAAG GCAAGAGCAA GAATTATGAC AATGTTATTG ATTTGTTCAG AGAATAA
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Protein sequence | MAVLKNKLKQ LENGNYVDNS GNEIKATEFL NVLIPKKLKW TRGDYIVGLQ ESFIQLSKLG LTGEQWNVLT YLIGKTDFEN YIHITQKEIS EHLGIKQQNV SKALKVLVDK EVIKKLKQGT SNYYLFNPEI IYKGKSKNYD NVIDLFRE
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