Gene Rpic12D_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0780 
Symbol 
ID8018409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp808118 
End bp808564 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content33% 
IMG OID644829558 
Producttranscriptional regulator, TrmB 
Protein accessionYP_002980753 
Protein GI241662393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0895418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.140055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCT TGAAGAATAA ATTGAAGCAG TTAGAAAATG GAAATTATGT AGACAATTCA 
GGAAACGAGA TCAAAGCAAC CGAATTTCTG AATGTCCTAA TACCAAAAAA ACTGAAATGG
ACAAGAGGAG ATTATATCGT GGGCTTACAA GAGAGTTTTA TTCAACTATC AAAACTTGGT
CTAACTGGCG AACAATGGAA TGTTTTGACC TACCTTATTG GCAAAACTGA TTTTGAGAAT
TACATACACA TAACTCAAAA AGAAATCAGT GAACACCTTG GAATTAAACA ACAGAATGTA
TCGAAGGCTC TAAAAGTGCT TGTCGATAAA GAAGTAATCA AGAAACTCAA ACAAGGAACT
TCTAATTACT ATCTTTTCAA CCCCGAGATA ATTTACAAAG GCAAGAGCAA GAATTATGAC
AATGTTATTG ATTTGTTCAG AGAATAA
 
Protein sequence
MAVLKNKLKQ LENGNYVDNS GNEIKATEFL NVLIPKKLKW TRGDYIVGLQ ESFIQLSKLG 
LTGEQWNVLT YLIGKTDFEN YIHITQKEIS EHLGIKQQNV SKALKVLVDK EVIKKLKQGT
SNYYLFNPEI IYKGKSKNYD NVIDLFRE