Gene Rpic12D_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0777 
Symbol 
ID8018406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp806080 
End bp806607 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content65% 
IMG OID644829555 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002980750 
Protein GI241662390 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.079417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.163575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG ATACCACCGA TCTGCGCATT CTGCAGGTGT TGCAGGAAGA CGGCCGCATC 
AGCAACCAGG ATTTGGCGGA GCGCGTCGCG CTGTCGCCGT CAGCGTGCCT GCGGCGGGTG
CGGATGCTGG AAGAGGGCGG CGCCATCACC GGTTATCGGG CGCAACTGGG CCGCGCCGCG
CTCGGGCTGG AACTGGAAGC GATCGTGCAG GTGTCGATGC GCCAAGACGT GACGGGCTGG
CACGAGACGT TCATGGCCGC CGTGCAGAGT TGGCCCGAGA TCGTGGCCGC TTACATCATC
ACTGGGGATT GCAACTACAT CCTGCGCGTG CAGGCGCCCA ACCTGCAGCA CTACTCGGAG
TTCATCATCG AGCGGCTGTA CAAGACGCCT GGCGTGATGG ACATCCGCTC GAATATCGTT
CTGCGCACCA TCAAGGACCG CGACGGCGGT CTGGCGCTGT TGATGGAAGC GCGGGGCGTG
CGTCCGCTCG AGGGCAAGGC GACGGGCAAG GGCGGGAGAG CAAAGTAG
 
Protein sequence
MQLDTTDLRI LQVLQEDGRI SNQDLAERVA LSPSACLRRV RMLEEGGAIT GYRAQLGRAA 
LGLELEAIVQ VSMRQDVTGW HETFMAAVQS WPEIVAAYII TGDCNYILRV QAPNLQHYSE
FIIERLYKTP GVMDIRSNIV LRTIKDRDGG LALLMEARGV RPLEGKATGK GGRAK