| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0776 |
|---|
| Symbol | |
|---|
| ID | 8018405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 805302 |
|---|
| End bp | 805931 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644829554 |
|---|
| Product | arylformamidase |
|---|
| Protein accession | YP_002980749 |
|---|
| Protein GI | 241662389 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR03035] arylformamidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0200233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.24854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAACGCA CTTTGTGGGA CATCAGCCCC GCCCTCTCGC CTGCCACGCC CACTTGGCCC
GGCGATACGC CGTTTTCGCA GGAAATTGCG TGGAAGCTCG AAGGTGACTG CCCAGTCAAC
GTCGGACGCA TCACGCTCTC GCCGCACACG GGTGCGCATG CCGATGCCCC GCTGCACTAC
CGCGCGGATG GCACTGCCAT CGGCCAGGTG CCGCTGGACG CCTACCTGGG CCCATGCCGC
GTTATCCACT GCGTAGGTGT AGCGCGCGTC GAGCCGGAAC ACGTGCGGGA AGCGCTGACC
TGCACACCGC CCCGCGTGCT GCTGCGCACG TACGCACAGA TGCCGCAAAC CGCGTGGGAC
GACGACTTTG CCGCCGTTGC GCCCGAGACG ATCGCATTGA TGGCCGCGCA CGGCGTCAAG
CTCATTGGCG TCGACACCGC CTCGCTCGAC CCGCAGACCT CCAAGACCAT GGACGCGCAC
CACGCCGTGG GCAAACACGG CCTCGCCATC CTCGAAGGGC TCGTGCTTGA CGACGTGCCC
GCCGGCGATT ACGAACTGAT CGCCCTGCCA CTCAAGTTCG CCACGCTCGA TGCGAGTCCG
GTGCGCGCCG TGCTGCGCAG CCTCCCCTGA
|
|---|
| Protein sequence | MERTLWDISP ALSPATPTWP GDTPFSQEIA WKLEGDCPVN VGRITLSPHT GAHADAPLHY
RADGTAIGQV PLDAYLGPCR VIHCVGVARV EPEHVREALT CTPPRVLLRT YAQMPQTAWD
DDFAAVAPET IALMAAHGVK LIGVDTASLD PQTSKTMDAH HAVGKHGLAI LEGLVLDDVP
AGDYELIALP LKFATLDASP VRAVLRSLP
|
|---|
| |