Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0774 |
Symbol | |
ID | 8018403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 803126 |
End bp | 804001 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829552 |
Product | tryptophan 2,3-dioxygenase |
Protein accession | YP_002980747 |
Protein GI | 241662387 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.200529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACC CGAACCAACC CGCAGCATCG GGCTGCCCCA TGCATGCCGC CCAGGGCGAA GGCTGGCACG ACGCGCAGCT CGATTTTTCA AAATCGATGA GCTATGGCGA CTACCTCGCG CTCGACCAGA TCCTGAACGC GCAGCATCCG CGCTCGCCGG ATCACAACGA GATGCTCTTC ATCGTCCAGC ACCAGACCAC CGAGCTGTGG ATGAAGCTGA TGCTGCACGA GCTGCGCGCC GCGCGGGATT GCGTGCGCAA TGACAACCTG CCGCCTGCGT TCAAGATGCT GGCGCGCGTG TCGCGCATCA TGGATCAGCT GGTGCAGGCG TGGAACGTGC TCGCCACGAT GACGCCGCCG GAGTACTCGG CCATGCGTCC GCACCTCGGG CAATCGTCAG GCTTTCAGTC GTATCAGTAC CGCGAGATCG AGTTCATCCT CGGCAACAAG AACGCGGCGA TGCTCAAGCC GCACGCGCAT CGCACCGAGC ATTACGAACA GGTCAAGGCT GCGTTGGAAA CGCCGTCGCT GTACGACGAG GCGGTGCGTT ACATGGCGCG TCACGGCTTT GCATTCGACG CAGATTGCAT CGAGCGTGAC TGGTCGCGTC CCGTGACTTA CAACGCCTCG GTGGAAGCGG CGTGGCTGGA GGTCTATCGA GACCCGACGC ACCACTGGGA GCTGTACGAG CTGGCTGAGA AGTTCGTCGA TCTGGAAGAT GCGTTCCGGC AATGGCGCTT CCGGCATGTG ACCACGGTCG AGCGCGTGAT TGGCTTCAAG CGTGGCACGG GCGGCACCGA GGGCGTCGGT TACCTGCGGA AGATGCTGGA TGTGGTGTTG TTTCCGGAGC TTTGGAAGTT GCGGACGGAC CTTTGA
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Protein sequence | MSNPNQPAAS GCPMHAAQGE GWHDAQLDFS KSMSYGDYLA LDQILNAQHP RSPDHNEMLF IVQHQTTELW MKLMLHELRA ARDCVRNDNL PPAFKMLARV SRIMDQLVQA WNVLATMTPP EYSAMRPHLG QSSGFQSYQY REIEFILGNK NAAMLKPHAH RTEHYEQVKA ALETPSLYDE AVRYMARHGF AFDADCIERD WSRPVTYNAS VEAAWLEVYR DPTHHWELYE LAEKFVDLED AFRQWRFRHV TTVERVIGFK RGTGGTEGVG YLRKMLDVVL FPELWKLRTD L
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