Gene Rpic12D_0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0774 
Symbol 
ID8018403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp803126 
End bp804001 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content62% 
IMG OID644829552 
Producttryptophan 2,3-dioxygenase 
Protein accessionYP_002980747 
Protein GI241662387 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3483] Tryptophan 2,3-dioxygenase (vermilion) 
TIGRFAM ID[TIGR03036] tryptophan 2,3-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.200529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC CGAACCAACC CGCAGCATCG GGCTGCCCCA TGCATGCCGC CCAGGGCGAA 
GGCTGGCACG ACGCGCAGCT CGATTTTTCA AAATCGATGA GCTATGGCGA CTACCTCGCG
CTCGACCAGA TCCTGAACGC GCAGCATCCG CGCTCGCCGG ATCACAACGA GATGCTCTTC
ATCGTCCAGC ACCAGACCAC CGAGCTGTGG ATGAAGCTGA TGCTGCACGA GCTGCGCGCC
GCGCGGGATT GCGTGCGCAA TGACAACCTG CCGCCTGCGT TCAAGATGCT GGCGCGCGTG
TCGCGCATCA TGGATCAGCT GGTGCAGGCG TGGAACGTGC TCGCCACGAT GACGCCGCCG
GAGTACTCGG CCATGCGTCC GCACCTCGGG CAATCGTCAG GCTTTCAGTC GTATCAGTAC
CGCGAGATCG AGTTCATCCT CGGCAACAAG AACGCGGCGA TGCTCAAGCC GCACGCGCAT
CGCACCGAGC ATTACGAACA GGTCAAGGCT GCGTTGGAAA CGCCGTCGCT GTACGACGAG
GCGGTGCGTT ACATGGCGCG TCACGGCTTT GCATTCGACG CAGATTGCAT CGAGCGTGAC
TGGTCGCGTC CCGTGACTTA CAACGCCTCG GTGGAAGCGG CGTGGCTGGA GGTCTATCGA
GACCCGACGC ACCACTGGGA GCTGTACGAG CTGGCTGAGA AGTTCGTCGA TCTGGAAGAT
GCGTTCCGGC AATGGCGCTT CCGGCATGTG ACCACGGTCG AGCGCGTGAT TGGCTTCAAG
CGTGGCACGG GCGGCACCGA GGGCGTCGGT TACCTGCGGA AGATGCTGGA TGTGGTGTTG
TTTCCGGAGC TTTGGAAGTT GCGGACGGAC CTTTGA
 
Protein sequence
MSNPNQPAAS GCPMHAAQGE GWHDAQLDFS KSMSYGDYLA LDQILNAQHP RSPDHNEMLF 
IVQHQTTELW MKLMLHELRA ARDCVRNDNL PPAFKMLARV SRIMDQLVQA WNVLATMTPP
EYSAMRPHLG QSSGFQSYQY REIEFILGNK NAAMLKPHAH RTEHYEQVKA ALETPSLYDE
AVRYMARHGF AFDADCIERD WSRPVTYNAS VEAAWLEVYR DPTHHWELYE LAEKFVDLED
AFRQWRFRHV TTVERVIGFK RGTGGTEGVG YLRKMLDVVL FPELWKLRTD L