Gene Rpic12D_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0762 
Symbol 
ID8018391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp792906 
End bp793808 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID644829540 
ProductTaurine dioxygenase 
Protein accessionYP_002980735 
Protein GI241662375 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.059685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG CCGTTGTTAC CCCGGATGCT CCTGCCGTCC ACACAGCCCG CTTCCACATT 
CGCCGCCTGC CCGACGCGCC GCTTGGCGCA GAGGTTCTCG GCCTGGGCGA TGCATCCGAC
TTGTCTGACG CGGACATCGC CGCCATCCGC CAAGCGTGGC TCGCGCATGA CGGCCTGCTC
GTTTTCCGTG ACGTCGAATT CACGCCGCAG GCGCAAGTTG CCTTCAGCCG CCGCTTCGGC
CCGCAGCAGG TGCATGTGCT GAACCAGTTT CATCTGAGCG GCTATCCGGA AATCCTGGTC
GTTTCCAACG TGGTTGAGAA CGGCAAGCCG ATCGGCCTGG GCGATGCAGG GCGGGATTGG
CATTCAGACC TGTCGTACAA GCCGCTGCCG AGCCTCGGTT CGATGCTGCT CACGCGCGAG
TTGCCGGAAG AGGGCGGCGA TACGCTGTTC GCCAACATGG TGCGCGCCTA TGAAACGCTG
CCGGCCAATC TCAAGCGCGT CATCGAAGGC CGCCGTGCGG TGCATTCGTA TGTGTACCGC
TATGACCGAC TGCGCGCGCT GTCGACCTGG CGTCCGCCGC TCACGCAAGC GCAGCGCGAC
GCCGTGCCGC CGGTCGATCA CCCCGTTGTG CGCACGCATC CGGAAACGGG CAAGCGTGCG
CTCTTCGTCA ACGAGGGCTT CACCTCGCAC ATCATCGGCT TGCCGGAAGA CGAAAGCACC
AGCGTGCTGG AGCAGCTCTT CGCCCACAGC GTCCGCGCCG ACAACGTCTA CACGCACCAG
TGGCGCCCCG GCGACATGCT GTTCTGGGAT AACCGCTCCA CCATCCACTT TGCGCCCGGC
TGCCCAGACA AGTATCGGCG CACGCTGCAT CGCACGACCA TCGAAGGCGA CGTGCCGGCT
TAG
 
Protein sequence
MSDAVVTPDA PAVHTARFHI RRLPDAPLGA EVLGLGDASD LSDADIAAIR QAWLAHDGLL 
VFRDVEFTPQ AQVAFSRRFG PQQVHVLNQF HLSGYPEILV VSNVVENGKP IGLGDAGRDW
HSDLSYKPLP SLGSMLLTRE LPEEGGDTLF ANMVRAYETL PANLKRVIEG RRAVHSYVYR
YDRLRALSTW RPPLTQAQRD AVPPVDHPVV RTHPETGKRA LFVNEGFTSH IIGLPEDEST
SVLEQLFAHS VRADNVYTHQ WRPGDMLFWD NRSTIHFAPG CPDKYRRTLH RTTIEGDVPA