Gene Rpic12D_0760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0760 
Symbol 
ID8018389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp791057 
End bp791542 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID644829538 
Productnucleoside 2-deoxyribosyltransferase 
Protein accessionYP_002980733 
Protein GI241662373 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.154684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.129974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC GCCTGTATCT CGCGGGGCCG GACGTTTTTC GTCCGGAGCC CATTGCGCAC 
GGCGAGGCGC TGAAGGTGTT GTGCGCAGAG TTTGGTTTTG TCGGCCTGTA CCCGCTGGAT
AACACGATCG CTCCCCAGGC AGATGGGCCT GCTACCGCCG CTGAAATCTA CCGGCAGAAC
ATCGCGCTGA TCGATCTGGC GGATGCCGTG CTGGCCAACG TAGCGGACTT CCGGGGCCAC
GAGCCAGATT CCGGCACGTG CTTCGAAATC GGTTACGCCA TCGCCCGCGG CAAAGACGTG
TGGTGCTATC ACGTGCCCGC CGCGCCGCTC CTGGCGCAGG TGCCGAACAC CAACGGCAAC
GATGCCGACG GCTGGGCCGT GGAAGATTTC GGCCTGCCGC GCAACCTCAT GATCGCGTGC
AGTTGTCACC TCGTCGTGGG CGATGTGCGC GCGTGTCTCG AGCGCATGCG CCTGCACTAC
GCATAG
 
Protein sequence
MTLRLYLAGP DVFRPEPIAH GEALKVLCAE FGFVGLYPLD NTIAPQADGP ATAAEIYRQN 
IALIDLADAV LANVADFRGH EPDSGTCFEI GYAIARGKDV WCYHVPAAPL LAQVPNTNGN
DADGWAVEDF GLPRNLMIAC SCHLVVGDVR ACLERMRLHY A