Gene Rpic12D_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0757 
Symbol 
ID8018386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp787657 
End bp788937 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content63% 
IMG OID644829535 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002980730 
Protein GI241662370 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.237029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.160751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC AACTTGCTGC GCGGCGCTGG TGGATGATCA TGCCGATCGT CTTTATCACC 
TACAGCCTGG CCTACCTCGA CCGCGCGAAC TATGGCTTCG CGGCGGCGGC CGGCATCAAT
CACGATCTGG GGATCAGCCA GGGGCTCTCG TCGTTGATTG GTGCGCTGTT CTTCCTCGGC
TATTTCTTCT TCCAGATTCC CGGCGCGATC TACGCAGAAC GCCGCAGCGT GAAGAAGCTC
GTGTTCATCA GCCTCGTGCT GTGGGGCTTG TGCGCCGCGC TCACGGGCGT CGTGAGTGAC
ATTCCAACGT TGATGGCGAT CCGGTTTGTA CTGGGTGTGG TCGAGGCGGC CGTCATGCCG
GCGATGCTCA TCTACATCAG CAACTGGTTT ACCAAGCACG AGCGTTCGCG CGCGAATACA
TTTCTGATTC TGGGCAATCC CGTGACCGTG CTCTGGATGT CGGTGGTGTC GGGCTACCTC
GTGCGCGAGT TCGGCTGGCG CCATATGTTC ATCGCCGAGG GCGTGCCCGC CATCATCTGG
GCCGTGTGCT GGTGGTGCCT GGTGCAGGAC AAGCCCGCGC AGGCGCCGTG GCTGAACCCA
CAGGAAAAGC GCGACCTGGA ACAAGCCTTG GCGACGGAAC AGGCGGCCAT CAAGCCGATG
CGCAACTATG GCGAGGCCTT CCGCTCGCCT GTCGTCATCA AGCTGTGCGC GCAGTACTTC
TGCTGGAGCA TCGGCGTCTA TGGCTTCGTG CTGTGGCTAC CGTCCATCGT GAAGAACGGC
TCGTCGCTTG GCATGGTCGA GACGGGCTGG CTGTCGGCGC TGCCGTATCT GGCTGCCACC
ATCGCGATGC TCGCGGCGTC TTGGGCATCC GACAAGGTGG GCTCGCGGCG CGGCTTCGTT
TGGCCGTTCC TGCTGGTGGG CGCAGCGGCG TTTGCTGCAT CGTTTGCTCT CGGGTCCACG
CATTTCTGGA TGTCGTATGT GCTGCTCGTG ATTGCCGGCG CGGCGATGTA CGCACCGTAT
GGTCCGTTCT TCGCGATCGT GCCGGAGCTT CTGCCGAAGA ACGTCGCCGG TGGCGCGATG
GCGCTGATCA ACAGCATGGG TGCTCTCGGT TCGTTTGTCG GCTCGTACTT CGTTGGCTAC
CTGAACGGTG CCACCGGCTC GCCGCTGGCG TCGTACGCTT TCATGAGCGC CGCGCTCCTC
GCAGCCGTAG TGCTTACGCT TTGCGTCAAG CCGCAACCGC GTGATGCGTA CACGCTCGCC
CACCCTGTGC CTGGAAAATG A
 
Protein sequence
MATQLAARRW WMIMPIVFIT YSLAYLDRAN YGFAAAAGIN HDLGISQGLS SLIGALFFLG 
YFFFQIPGAI YAERRSVKKL VFISLVLWGL CAALTGVVSD IPTLMAIRFV LGVVEAAVMP
AMLIYISNWF TKHERSRANT FLILGNPVTV LWMSVVSGYL VREFGWRHMF IAEGVPAIIW
AVCWWCLVQD KPAQAPWLNP QEKRDLEQAL ATEQAAIKPM RNYGEAFRSP VVIKLCAQYF
CWSIGVYGFV LWLPSIVKNG SSLGMVETGW LSALPYLAAT IAMLAASWAS DKVGSRRGFV
WPFLLVGAAA FAASFALGST HFWMSYVLLV IAGAAMYAPY GPFFAIVPEL LPKNVAGGAM
ALINSMGALG SFVGSYFVGY LNGATGSPLA SYAFMSAALL AAVVLTLCVK PQPRDAYTLA
HPVPGK