| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0752 |
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| Symbol | |
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| ID | 8018380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 781987 |
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| End bp | 783426 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644829529 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_002980725 |
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| Protein GI | 241662365 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.121113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGAC TTTTTCTAAA AAAGGTGTTG CTGCTTGCGG CATTGATGAT GGCAAGCACT
TTCGCGCAGC TTGTCCACGC GGCGAATGCT GTCGATATCA AGCACCGCTA CGCATTGGTA
ATAGGCAATG CAAAATACAG CGTTCCGGCC AACGTCTTGC TCAATCCTGT GAATGACGCA
GCGCTTGTGT CGGATGCGTT GCGCAAGCGG GGTTTCCAAG TAACCAGCCT CATCAATCAA
AGCAGAGCAC AGATGGAGAA AGCGGTTGAC GACTTCGCTG GTCGGGCCGA AGGTGCGGAT
TTAGCGCTGG TGTATTACGC AGGCCATGCC GTGGCAATCG ACGGGATCAA TTATTTGTTT
GGCGTCGATC TCGGCATGCC ACTGAGCGGC GTGAACATTA GTTTGGCTCA GCAAAGCGCA
TTAAGCATGA AGGTCATCTT GATGGCGCTC AATCGCGCCA AGATTCGAGC GCGACTGCTG
GTTCTCGACG CATGCCGGGT CAACTTGACT CGCGGGGCGG ATCAAGCTGG CTCCTTGGCG
AAAGTGGTAC CAGCCGGAGG GGAGCTCATC GCTTTTTCGA CTCAGCCTGG CGCTACGGCG
GAGGATGGGT TTACTCAGGG CGGCCCCAAA AACAGTCCCT ATGCTTACTA CTTTTCATCC
AGGTTGCAGG CGCTATCGCC AGACGAGCCC GTTGAGAATT TCTTCAAGCA AGTCACTGGC
GACGTGCAAA CAGTAACCCA ATATCGACAA ATACCCAGTT ATAGCGCCAG CTTGGTTGGT
GACGTGACTT TTGTCAGCTA CAGGAATACT ACAACGGCGG CATTCGGCTC AGTTGGCGTG
ATGATGGAAC AAAGGCGTGG GGTCGATCCG GCACTTAGCA AGAACATGCT CTGGATGCGT
CTGGACGATT GGGCCATTGA TATCGAGCGA TCAGCGCGTA ATGCGGACGC GCTGGAATTG
AAATCCATGC GCGCAAGGGC TGAGATGGGG GATGTCATGG CGATCACCGA GCTGGGCATG
ATCTCAGGCT TGGGAAAAAT TGTGCCTAAG GACATGGTCG AAGCAAAAAG GCGTTTTGAG
CAAGCGGCAA AAATGGGGTT CCCCTTGGCC AAGACATATC TGGCTGCAAT GCTTTGGCTT
GGTAAAAACA CGCCGGCCGA GATTGCCCGG GCCCGTGTCG AGGCGGAGCC GCTCCTGCGG
GAAGCATGGG ATGGAGGTTC ACACCGAGCG GCGAGGCAAC TTCTTTGGGT ACAGAATCTT
CTGGATAAAC AACCCAACCC GGTCGATTTG AAACGCTACA ACGACGAAAC ATATGAGTAT
GTCAGGTTAG GTGGTGATCC CCTGAACATG AAGATGCAAA AAAATGGTAT TTGTCCCGCG
GACATGTCGG TGCGTGAATG CATAATTGCC CATCCTGAAA TTCCGATTAA TGAAATATAA
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| Protein sequence | MYRLFLKKVL LLAALMMAST FAQLVHAANA VDIKHRYALV IGNAKYSVPA NVLLNPVNDA
ALVSDALRKR GFQVTSLINQ SRAQMEKAVD DFAGRAEGAD LALVYYAGHA VAIDGINYLF
GVDLGMPLSG VNISLAQQSA LSMKVILMAL NRAKIRARLL VLDACRVNLT RGADQAGSLA
KVVPAGGELI AFSTQPGATA EDGFTQGGPK NSPYAYYFSS RLQALSPDEP VENFFKQVTG
DVQTVTQYRQ IPSYSASLVG DVTFVSYRNT TTAAFGSVGV MMEQRRGVDP ALSKNMLWMR
LDDWAIDIER SARNADALEL KSMRARAEMG DVMAITELGM ISGLGKIVPK DMVEAKRRFE
QAAKMGFPLA KTYLAAMLWL GKNTPAEIAR ARVEAEPLLR EAWDGGSHRA ARQLLWVQNL
LDKQPNPVDL KRYNDETYEY VRLGGDPLNM KMQKNGICPA DMSVRECIIA HPEIPINEI
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