Gene Rpic12D_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0732 
Symbol 
ID8018359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp763496 
End bp764611 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content64% 
IMG OID644829508 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_002980705 
Protein GI241662345 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.90241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.157208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATA TCGACCTCAA CGTGTTGTCC CACACAGTGC TGTGGGGCAC GTTTGTGCTG 
ACGTTCGTGT TTGGCGCGAT CCTTCAGCGC ACGCACTTCT GCACGATGGG CGCGGTGTCC
GATGTCGTCA ACATCGGCGA CTGGAATCGG CTGCGCATGT GGGCGCTGGC CATCGGCGTG
GCCATGATCG GCACGGGATG CCTGAGCTGG CTTGGCCTGA TCGATACGAG CAAGACGATC
TACACGGCGA GCAAGCTGCT GTGGCTGTCG TCGCTGGTGG GCGGGCTGTT GTTCGGCTTC
GGCATGGTGC TGGGCTCGGG GTGCGGCAGC AAGACGCTGG TGCGCATCGG CGGCGGCAAT
CTCAAGTCGG TCGTGGTGTT CGTGTTCCTG GGGCTTGCGG CGTACATGAC GCTCAAGGGC
GTGTTTGGCG TGGTGCGTGT GGCAACGGTG GACAGCGTAG CCGTTGCGTT GCCGACGTCG
CAGGATCTGC CGAGCGTGCT GGGCCACGCG TTCTCCGGCG ATGTGCGCAT GCTGCGTCTG
GTGCTGGCGC TGGGGATCGG CGGGGCGCTG TCGCTGTGGG CGCTGCTGGG GCGCGATTTC
CGCACGGGCG ACAACCTGCT GGGCGGCATC GGCGTCGGGC TTATCATCGT CGGCATGTGG
TACGTATCGG GGCATCTCGG TTACGTGCAG GAAGATCCGA ACACGCTGCA GGAAGCGTTT
GTGGCGACCA ACAGCGGGCG CATGGAAGCG CTGAGCTTCG TGGCTCCGGT GTCGTACACG
CTGGAGTGGC TGATGTTCTT CAGTGATACA TCGAAGGTAC TGACGGTCGG CATTGTGAGC
GTGCTTGGCG TGATTGCAGG ATCGGCAGCG GTGGCGCTGG CCACGCGCAC GTTCCGCTGG
GAGGGCTTTG CCAATGCCGA GGACACGGGC AACCACATCA TTGGCGGCAT CCTGATGGGC
ATTGGGGGCG TTACGGCGCT GGGTTGCACG ATCGGGCAGG GGCTGTCGGG CGTGTCGACG
CTGGCGATCG GTTCGTTCAT CGCGCTGGCC GGCATCGTGA TCGGTGCGGT GCTGGCGTTC
CGCTACCAGA TGTGGCGAAT GGAGCAGCTC GTTTGA
 
Protein sequence
MPDIDLNVLS HTVLWGTFVL TFVFGAILQR THFCTMGAVS DVVNIGDWNR LRMWALAIGV 
AMIGTGCLSW LGLIDTSKTI YTASKLLWLS SLVGGLLFGF GMVLGSGCGS KTLVRIGGGN
LKSVVVFVFL GLAAYMTLKG VFGVVRVATV DSVAVALPTS QDLPSVLGHA FSGDVRMLRL
VLALGIGGAL SLWALLGRDF RTGDNLLGGI GVGLIIVGMW YVSGHLGYVQ EDPNTLQEAF
VATNSGRMEA LSFVAPVSYT LEWLMFFSDT SKVLTVGIVS VLGVIAGSAA VALATRTFRW
EGFANAEDTG NHIIGGILMG IGGVTALGCT IGQGLSGVST LAIGSFIALA GIVIGAVLAF
RYQMWRMEQL V