Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0726 |
Symbol | |
ID | 8018353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 758360 |
End bp | 758794 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829502 |
Product | protein TolR |
Protein accession | YP_002980699 |
Protein GI | 241662339 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.784758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0760523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTACCA TCCAGCGAAC GCGCCGCGCC CGACGGGCCA AGGCCGACAT CAACGTCGTT CCGTACATCG ACGTGATGCT GGTGCTGCTG GTCATCTTCA TGGTGGCGGC GCCCGTGGTG AACCCGGGCG TGGTCAATCT GCCATCGGTG GCCAACGCGA CGCCGCAGCA GACGCAGCCG CCCATTGTGG TGACCATCAA GAGCGACGGC ACGATCCTTG CTCGCATCAA GACCGGTTCC GGCGCCACCG AGCAGAAGCT CGCCAACAAC AACGAGCTGC GCGCATTCGT GAAGCAGCGC ACTGACGAAA ACCCCGACCA GCCCGTCGTG ATTGCCGCCG ACAAGTCGGT CCAGTACGAC CGCGTGCTGA CCGTCATGAG CGTGCTCAAG GGCGATGGCG TAAAGCGCGT CGGCCTGATG GTGAAATCGT CATGA
|
Protein sequence | MATIQRTRRA RRAKADINVV PYIDVMLVLL VIFMVAAPVV NPGVVNLPSV ANATPQQTQP PIVVTIKSDG TILARIKTGS GATEQKLANN NELRAFVKQR TDENPDQPVV IAADKSVQYD RVLTVMSVLK GDGVKRVGLM VKSS
|
| |