Gene Rpic12D_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0726 
Symbol 
ID8018353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp758360 
End bp758794 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content63% 
IMG OID644829502 
Productprotein TolR 
Protein accessionYP_002980699 
Protein GI241662339 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.784758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0760523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCA TCCAGCGAAC GCGCCGCGCC CGACGGGCCA AGGCCGACAT CAACGTCGTT 
CCGTACATCG ACGTGATGCT GGTGCTGCTG GTCATCTTCA TGGTGGCGGC GCCCGTGGTG
AACCCGGGCG TGGTCAATCT GCCATCGGTG GCCAACGCGA CGCCGCAGCA GACGCAGCCG
CCCATTGTGG TGACCATCAA GAGCGACGGC ACGATCCTTG CTCGCATCAA GACCGGTTCC
GGCGCCACCG AGCAGAAGCT CGCCAACAAC AACGAGCTGC GCGCATTCGT GAAGCAGCGC
ACTGACGAAA ACCCCGACCA GCCCGTCGTG ATTGCCGCCG ACAAGTCGGT CCAGTACGAC
CGCGTGCTGA CCGTCATGAG CGTGCTCAAG GGCGATGGCG TAAAGCGCGT CGGCCTGATG
GTGAAATCGT CATGA
 
Protein sequence
MATIQRTRRA RRAKADINVV PYIDVMLVLL VIFMVAAPVV NPGVVNLPSV ANATPQQTQP 
PIVVTIKSDG TILARIKTGS GATEQKLANN NELRAFVKQR TDENPDQPVV IAADKSVQYD
RVLTVMSVLK GDGVKRVGLM VKSS