| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0725 |
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| Symbol | |
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| ID | 8018352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 757655 |
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| End bp | 758347 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829501 |
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| Product | protein TolQ |
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| Protein accession | YP_002980698 |
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| Protein GI | 241662338 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.750364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0773075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCG TCGAGGTCAC ACAAGATCTG TCGATCGTCT CGCTGGTGCT GCATGCCAGC
CTCTTGGTCC AATTCGTCAT GGGCCTCTTG CTGGTGATGT CGCTGTTCTC ATGGACGTAC
ATCTTCCGCA AAGCCTTTGC ACTACGCGCA GCGCGCAGCC AGACCGAATC GTTCGAGCGC
GATTTTTGGG CCGGCGGCGA CTTGCAGGCG CTGTATCAGA GCGCTGCCAA CAACCGCCAC
ACCACCGGCG CGCTGGAACG TATCTTCGAA GCCGGCATGC GCGAATACCT GAAGGCGCGT
GAGTTGCAGC GCGGCGGCGG CGATCCGAGC GCCATTCTCG ATGCCTCGCG CCGTGCCATG
CGCGCCGCCT ACCAGCGCGA GATGGACTCG CTGGAGTCCC ACCTGCCGTT CCTCGCGTCG
GTCGGCTCGG TCAGTCCGTA TATCGGCCTG TTCGGCACGG TCTGGGGGAT CATGAACGCC
TTTCGCGGCC TGTCCAACGT ACAACAGGCG ACCCTCTCGG CCGTAGCGCC CGGTATTGCC
GAAGCGCTGG TCGCCACGGC CATCGGTCTG TTTGCGGCCA TTCCGGCGGT GATCGCCTAC
AACCGCTATG CCACCGAGAT CGACCGCCTG GCCAACCGCT TCGAGAGCTT CATGGAAGAG
TTCTCGAACA TCCTCCAGCG CCAGACGCGC TAA
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| Protein sequence | MNPVEVTQDL SIVSLVLHAS LLVQFVMGLL LVMSLFSWTY IFRKAFALRA ARSQTESFER
DFWAGGDLQA LYQSAANNRH TTGALERIFE AGMREYLKAR ELQRGGGDPS AILDASRRAM
RAAYQREMDS LESHLPFLAS VGSVSPYIGL FGTVWGIMNA FRGLSNVQQA TLSAVAPGIA
EALVATAIGL FAAIPAVIAY NRYATEIDRL ANRFESFMEE FSNILQRQTR
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