Gene Rpic12D_0724 details

Gene Information

• Locus tag: Rpic12D_0724
• ID: 8018351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12D
• Kingdom: Bacteria
• Replicon accession: NC_012856
• Strand: +
• Start bp: 757254
• End bp: 757658
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644829500
• Product: tol-pal system-associated acyl-CoA thioesterase
• Protein accession: YP_002980697
• Protein GI: 241662337
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.763036
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.174534
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTTCTT TTGACTGGAA CCTGCGCGTG TATTGGGAAG ATACCGACGC AGGCGGCGTC 
GTGTTTTACG CCAACTATTT GAAATTTTTC GAGCGCGCCC GCACCGAGTG GCTGCGCGCG 
CTTGGGGTCG ATCAGCAGGT GCTGGCCGAC ACGACCGGAG CCATTTTCGT GGTGCGTAGC 
ACTGCCGTGG ATTACCGCGC GCCGGCACGC CTGGACGACC TGCTTCAGAT CCGTTCGCGT 
ATGGAACGGG TCGGCCCCGC GTCGGTCCAA TTCGCCCAAG AAGGCTGGCG CGGCGACGTT 
TTGCTCGCAT CAGGCACGAT TCGTGTTGGA TGTGTCGACC GGCTCACTTT CCGGCCGACC 
CCGATTCCCG CTCCCGTACT CGCAACCATC AAAGCCGCCG CATGA 

 

Protein sequence

MSSFDWNLRV YWEDTDAGGV VFYANYLKFF ERARTEWLRA LGVDQQVLAD TTGAIFVVRS 
TAVDYRAPAR LDDLLQIRSR MERVGPASVQ FAQEGWRGDV LLASGTIRVG CVDRLTFRPT 
PIPAPVLATI KAAA