Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0722 |
Symbol | glyA |
ID | 8018349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 754783 |
End bp | 756093 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829498 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002980695 |
Protein GI | 241662335 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.59476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.142236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCCC ACGCCTCGCC CGATCTCCGC CATTTCCGTT TCGTTTCAGA CCAGACACTC GCCATGTTCG AACGCAGCCG CTATACGATC GACCAGATCG ATGCCGAAAT CTTCGCCGCC ATCCAGCAGG AAAATCAGCG TCAGGAAGAC CACATTGAGC TGATCGCCTC CGAGAACTAC ACCTCCCCGG CCGTGATGGC CGCGCAGGGT TCGCAACTGA CCAACAAGTA CGCCGAGGGC TATCCCGGCA AGCGTTACTA CGGCGGTTGC GAATACGTGG ACGTGGTGGA ACAGCTCGCC ATCGACCGCG TGAAGCAGCT CTTCGGCGCC GAAGCCGCCA ACGTGCAGCC GAACTCGGGC TCGCAGGCCA ACCAGGGCGT GTTCTTCGCC GTGCTCAAGC CGGGTGACAC GATCATGGGC ATGAGCCTGG CCGAAGGCGG CCACCTGACG CATGGCATGG CGCTCAACAT GAGCGGCAAG TGGTTCAACG TCGTCAGCTA CGGCCTGAAC GCGCAGGAAG ACATCGATTA CGACGCGCTC GAAGCCCTGG CGCAAGAGAA GAAGCCGAAG CTGATCATCG CAGGCGCATC CGCCTTTGCG CTGCGCATCG ATTTCGAGCG CATCGGCAAG ATCGCCAAGT CGATCGGCGC GTACTTCATG GTGGACATGG CGCACTACGC CGGCCTGATC GCTGCAGGTG TGTACCCGAA TCCCGTGCCG CACGCTGATT TCGTCACGAC GACCACCCAC AAGAGCCTGC GCGGCCCGCG CGGCGGCGTG ATCCTGATGA AGGCCGAGCA CGAGAAGGCC ATCAACTCGG CGATCTTCCC GGGTATCCAG GGCGGCCCGC TGATGCACGT GATCGCCGGC AAGGCGGTGG CGTTCAAGGA AGCGCTGTCG CCGGAGTTCA AGGCTTACCA GCAACAGGTC GTGAAGAACG CGGCCGTCAT GGCTGAAACG CTCATGGCCC GAGGCCTGCG GATCGTGTCC GGCCGCACGG AGAGCCACGT GATGCTGGTT GACCTGCGCG CCAAGAAGAT CACTGGCAAG GAAGCCGAAA AGGTGCTGGG CGACGCACAC ATCACCGTCA ACAAGAACGC GATTCCGAAT GACCCGGAAA AGCCGTTCGT GACGTCGGGC GTGCGCCTGG GTTCGCCGGC CATGACCACG CGTGGCTTCA AGGAAGCCGA GGCCGTGAAG GTCGCCCACC TGATCGCCGA TGTGCTGGAC AATCCGCACG ACGAAGCCAA CATCGCCGCC GTGCGCGCCA AGGTGGCTGA GCTGACCAAG CAGTTCCCGG TCTACGGCTG A
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Protein sequence | MFPHASPDLR HFRFVSDQTL AMFERSRYTI DQIDAEIFAA IQQENQRQED HIELIASENY TSPAVMAAQG SQLTNKYAEG YPGKRYYGGC EYVDVVEQLA IDRVKQLFGA EAANVQPNSG SQANQGVFFA VLKPGDTIMG MSLAEGGHLT HGMALNMSGK WFNVVSYGLN AQEDIDYDAL EALAQEKKPK LIIAGASAFA LRIDFERIGK IAKSIGAYFM VDMAHYAGLI AAGVYPNPVP HADFVTTTTH KSLRGPRGGV ILMKAEHEKA INSAIFPGIQ GGPLMHVIAG KAVAFKEALS PEFKAYQQQV VKNAAVMAET LMARGLRIVS GRTESHVMLV DLRAKKITGK EAEKVLGDAH ITVNKNAIPN DPEKPFVTSG VRLGSPAMTT RGFKEAEAVK VAHLIADVLD NPHDEANIAA VRAKVAELTK QFPVYG
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