| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0708 |
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| Symbol | |
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| ID | 8018335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 741402 |
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| End bp | 742514 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829484 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002980681 |
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| Protein GI | 241662321 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.101986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.745717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCTCCG ACTTCGACCA CGCCATGATG CAGCGCGCCC TGGCGCTGGC CGAGAAGGGC
TTGTTCACCA CCACGCCCAA CCCGCGCGTC GGGTGCGTGA TCGTGCGAGA CGACACCGTT
ATCGGCGAGG GCTACACACA ACCCGCCGGC CAGGACCACG CTGAAGTCCA AGCCATCAAG
GATGCCCAGT CGCGCGGCCA GGACGTGCGC GGCGCCACCG CTTATGTGAC GCTGGAGCCC
TGCAGCCACT TTGGCCGCAC CCCGCCCTGC GCAGATCGAC TGGTCGAAGC AGGCATTGCA
CGCGTGGTGG CGGCCATGGA AGATCCAAAT CCTGCCGTCT CCGGGCGTGG TCTGCAGAAG
CTGCGCGATG CCGGCGTGGA CGTGCGTTGC GGTCTGCTGG AGCGCGAGGC GCGTGAGCTG
AACATCGGTT TCGTTTCGCG CATGACGCGC GGCACGCCCT GGGTGCGCGT AAAGGTCGGC
GCATCGCTGG ACGGCCGCAC CGCGCTGGAC AACGGCGTCA GCCAATGGAT TACCGAAGCC
GAAGCGCGCA ACGACGGGCA CCGCTGGCGC GCGCGTGCCT GTGCCATCCT GACCGGCATC
GGCACCGTAC GCGAAGATAA TCCGCGACTG ACCGTGCGCG CCATCAACAC TCCGCGCCAG
CCTCGCCGCG TGCTGATCGA CTCGGCGCTG GACGTGCCAC TCGACGCCCA CATCCTCACC
GCAGATGGGC ACCACGAGCC GACGCTCATT TTTGCCGCTC AACCCGAAGC TGGCCGCATG
CGTGCGTTGA GCGAGCGCGG CGCGGAGGTC ATCCTGCTGC CGAACGCCGC AGGAAAAGTC
GATCTGGCCG CAGTCCTGCG CGAACTGGGT CGCCGCGAAA TCAACGAGCT GCACGTCGAA
GCCGGCTTCA AACTCAACGG CTCGCTGCTG CGCGAAGGGC TGGTTGACGA GATCCTAGTC
TATCTGGCGC CCAAGGTGCT CGGCTCGGGC CAGGGCATGT TCAATATGGG GCCGCTGCAG
ACGCTGGAAG GCGCGGCCGA ATTCTTCTTT CACGATATCT CGCGCATCGG GGGCGATCTC
CGCATCCTGG CGCGCCGCAA CCCGACGGAT TGA
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| Protein sequence | MFSDFDHAMM QRALALAEKG LFTTTPNPRV GCVIVRDDTV IGEGYTQPAG QDHAEVQAIK
DAQSRGQDVR GATAYVTLEP CSHFGRTPPC ADRLVEAGIA RVVAAMEDPN PAVSGRGLQK
LRDAGVDVRC GLLEREAREL NIGFVSRMTR GTPWVRVKVG ASLDGRTALD NGVSQWITEA
EARNDGHRWR ARACAILTGI GTVREDNPRL TVRAINTPRQ PRRVLIDSAL DVPLDAHILT
ADGHHEPTLI FAAQPEAGRM RALSERGAEV ILLPNAAGKV DLAAVLRELG RREINELHVE
AGFKLNGSLL REGLVDEILV YLAPKVLGSG QGMFNMGPLQ TLEGAAEFFF HDISRIGGDL
RILARRNPTD
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