Gene Rpic12D_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0704 
SymbolnusB 
ID8018331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp738398 
End bp738865 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID644829480 
Producttranscription antitermination protein NusB 
Protein accessionYP_002980677 
Protein GI241662317 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.505907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.913014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAG ACAATTCCCA AGCCAAGACC AAGGCCCCCG CCAAGAGCGC GCGCCGCCGT 
GCGCGCGAAC TGGCATTGCA GGGTCTGTAT CAATGGCTGC TCAATCGCAA CGACCCCGGT
GTGGTCGAGG CGCATCTGCA AGACGCACAA GGTTTCAACA AGGCCGACCG TGCGCACTTC
GACGCGCTGC TGCACGGTGC GATCCGCGAA GAAACCACGC TGACCGAGGC GTTCACGCCG
TACCTGGATC GCCCGGTTGC CGAGCTGTCG CCCGTCGAGC GTGCCGCCCT GCTGGTCGGC
GCGTACGAGT TGGTGCACTG CGTGGACATC CCGTACAAGG TCGTGATCAA CGAGGCCGTT
GAACTGACCA AGACCTTCGG CGGTGTGGAA GGCTACAAGT ACGTCAACGG CGTGCTGGAC
AAACTGGCCG CCCAGGTCCG CGCTGTCGAG GTCGCTGCCC GCCGGTAA
 
Protein sequence
MTQDNSQAKT KAPAKSARRR ARELALQGLY QWLLNRNDPG VVEAHLQDAQ GFNKADRAHF 
DALLHGAIRE ETTLTEAFTP YLDRPVAELS PVERAALLVG AYELVHCVDI PYKVVINEAV
ELTKTFGGVE GYKYVNGVLD KLAAQVRAVE VAARR