Gene Rpic12D_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0703 
Symbol 
ID8018330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp737170 
End bp738354 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content65% 
IMG OID644829479 
Productaminotransferase 
Protein accessionYP_002980676 
Protein GI241662316 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC ACCGCCTGCA GACAGCCGCC CGGCTGGCCA ATATCCGCGC CTTTCACGTG 
ATGGAGCTGG CCAAGCAGGC CCGCGAGCTG GAACTGGCTG GACGCAGCAT CATTCACATG
GGCATCGGCG AGCCGGACTT CACCGCCGCC GAGCCCGTCG TGCAAGCCGC GGCGGACGCC
ATGCGGCGCG GCGTCACGCA GTACACCGGG GCCTTGGGCA TTCGCCCGCT GCGCCAGGCT
ATCGCCCGCT ACTATCACAC CGTCTACGGC CTCGAGATTG CACCCGAGCG CATCATTGTG
ACGGCGGGCG CGTCGGCGGC ATTGCTGCTG GCGTGTGCGG TGCTGGTGGA GATCGGCGGC
GAAGTCCTGA TGCCCGATCC GAGCTATCCG TGCAACCGTC ACTTCGTGGC TGCCTTCAAT
GGCGAGGCAA AGCTGGTGCC GTCGGGGCCG GACGAACGCT TCCAGTTGAC GGCTGCGCAG
GTCGACGCTC ACTGGGGCGA CCGCACGCAG GGCGTGCTGC TGGCCTCTCC TTCCAATCCG
ACGGGCACGT CGATCCTGCC GGATGAGCTG CAGCGTATTG TGCAGACGGT ACGCGCGCGA
GGCGGATTTT CGATCGTCGA CGAGATTTAC CAAGGCCTTT CGTACGACCA AGCCCCCGTC
TCGGCACTGT CGTTCGGCGA CGATGTCGTC ACGATCAACA GCTTCTCCAA GTATTTCAAC
ATGACCGGCT GGCGACTCGG CTGGCTGGTG GCGCCCGCCG AACTGGTGCC CGAGTTCGAA
AAGGTCGCGC AGAACCTGTT CATCTGCGCG TCGGCGGTGG CGCAGTACGC GGCGCTTGCC
TGCTTCGAGC CGGAAGCGTT GGCGATTTAC GAAGAGCGCA AGGCCGAATT CCGCCGCCGC
CGGGATTTCA TTGTGCCGGC CCTGGAATCG CTCGGCTTCA AGGTACCGGT CAAGCCGGAC
GGAGCGTTCT ATGTTTACGC CGATTGCCGA GGCGTGAACC ATCCGCGTGC CGACGATGCC
GATGCCCTCA CCCAGTCGAT GCTGCACGAC GCGGGCGTGG TGCTCGTGCC GGGACTCGAT
TTTGGACCGC ATACGGCGCG GCACTACATC CGGCTGTCCT ACGCCACGTC GATGGCACAT
CTGGAAGAAG CGGTCGCACG GCTCGGCAAG CTATTCGGTC GATAA
 
Protein sequence
MDAHRLQTAA RLANIRAFHV MELAKQAREL ELAGRSIIHM GIGEPDFTAA EPVVQAAADA 
MRRGVTQYTG ALGIRPLRQA IARYYHTVYG LEIAPERIIV TAGASAALLL ACAVLVEIGG
EVLMPDPSYP CNRHFVAAFN GEAKLVPSGP DERFQLTAAQ VDAHWGDRTQ GVLLASPSNP
TGTSILPDEL QRIVQTVRAR GGFSIVDEIY QGLSYDQAPV SALSFGDDVV TINSFSKYFN
MTGWRLGWLV APAELVPEFE KVAQNLFICA SAVAQYAALA CFEPEALAIY EERKAEFRRR
RDFIVPALES LGFKVPVKPD GAFYVYADCR GVNHPRADDA DALTQSMLHD AGVVLVPGLD
FGPHTARHYI RLSYATSMAH LEEAVARLGK LFGR