Gene Rpic12D_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0673 
Symbol 
ID8018299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp705383 
End bp707542 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content67% 
IMG OID644829448 
Producthypothetical protein 
Protein accessionYP_002980646 
Protein GI241662286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAT CCCAAGCCGT CGAAGTCTTG CTGCGGCCAG CGGTGGAGCT TTACACCGTC 
GCGGTCTGTG CGGGCGCCGC GTTTCTGTGC CTGGTGGCCC CGTGGTCGCT CGCGCTGAGC
CCCTTGCTCG GCCTGGGCAG CGCGCTGGCC TTCCTGACCC TCGGCGCGCT GCGTTTCCAC
GACGCCTGGG CGATCCTGCG CTACCGGCGC AACATCCGCC GCCTGCCGCG CTACGTGATG
ACCAGCCGCG ATGTGCCGGT CAGCCAGCAG CGGCTGTTCG TCGGCCGGGG TTTCCGCTGG
GACCAGCGCC ACACGCACCG GCTGATGCAG ACCTACCGGC CGGAGTTCCG CCGCTACGTC
GAACCGACGG CGATCTACCG GGCGGCACGG CACTTCGAGC AGCGCCTGGA GTTCGCGCCG
TACCCCCTGT CCAAGCTGGC GAAGGCCCTG GCCTGGGACA GCCCGCTCAA CCCGGCGAGG
CCTCTGCCGC CAGTCGGTGG TCTGCCGCGC CTGCACGGCA TCGAGCCACA CGAGGTCGAC
GTCACCCTGC CGCTGGGCGA GCGCGTCGGC CATTCGCTGG TGCTCGGCAC CACCCGCGTC
GGCAAGACCC GCCTGGCCGA ACTGTTCATC ACCCAGGACA TCCGCCGCAA GGTGGGCGGC
CAGCACGAGG TCGTGATCGT CTTCGACCCC AAGGGCGACG CCGATCTGCT CAAGCGCATG
TACGTGGAAG CCAAACGCGC CGGGCGCGAA GGCGAGTTCT ACGTCTTCCA TTTGGGCTGG
CCGGACGTCA GCGCCCGCTA CAACGCCGTG GGGCGGTTCG GGCGCATCAG CGAAGTCGCC
ACGCGCATCG CGGGCCAGCT CTCCGGTGAA GGCAACAGCG CCGCGTTCCG CGAGTTCGCC
TGGCGCTTCG TCAACATCAT CGCCCGTGCC TTGGTCGAGC TGGGGCAGCG GCCCGACTAC
CTGCTGATCC AGCGCCACGT CATCAACATC GACGCGCTGT TCATCGAGTA CGCCCAGCAC
TACTTCGCCA GGAGCGAGCC CAAGGCCTGG GAGATCATCG TCCAGCTCGA AGCCAAGCTG
AACGACAAGA ACATCCCGCG CAACATGATC GGACGGGAGA AGCGCGTCGT CGCGCTGGAG
CAGTACCTGT CGCAGGTGCG CATCTACGAC CCGGTGCTCG ACGGGCTGCG CAGCGCCGTG
CGCTACGACA GGACGTACTT CGACAAGATC GTGGCGTCGC TCCTGCCGCT GCTGGAGAAG
CTGACCACCG GCAAGATCGC GCAGTTGCTG GCGCCGAACT ACTCGGACCT GGGCGACCCG
CGGCCGATCT TCGACTGGAT GCAGATCATC CGGAAGCGGG CCGTGGTCTA TGTCGGGCTG
GATGCGTTGT CGGACGCGGA GGTCGCGGCC GCAGTGGGAA ATTCCATGTT CAGCGATCTC
GTCTCGGTCG CCGGGCACAT CTACAAGTTC GGTATCGACG ATGGCCTGCC GGGCGCGTCG
GCAGGCGTGA AGGTGCCGAT CAACGTACAT GCCGACGAGT TCAACGAGCT GATGGGCGAC
GAGTTCATCC CGATGGTCAA CAAGGGCGGC GGCGCCGGGG TGCAGGTCAC GGCCTATACG
CAAACCATGA GCGACATCGA GGCCCGCATC GGCAACCGCG CCAAGGCCGG CCAGGTCATC
GGGAACTTCA ACAACCTGTT CATGCTGCGC GTGCGCGAGA CCATCACGGC CGAGCTGCTG
ACGCGGCAAC TGCCCAAGGT CGAGGTCTAC ACGACGACAG TGATGAGCGG CGCCACCGAC
AGTTCCGACC CGACCGGCAA CACCGCGTTC ACGTCGAACA CGCAGGACCG CATCAGCAGC
AACAGCGTGC CGCTGATCGA ACCGGCGCAC GTCGTCGGCC TGCCCAAGGG GCAGTGCTTC
GCGCTGATCG AGGGCGGCCA CCTGTGGAAG GTGCGCATGC CCTTGCCGGC GCCCGACCTC
GACGAGGCCA TGCCGAAGGA TCTGCAGGAA CTGGCCGGGT ACATGCGGCA GCACTACGTC
GAGGCCGGCG ACTGGTGGGA CAGCAAGGGG CTTCCCGGCC TGCAGGATCA GGCGCTGCCC
GACGAGCTGC TGGCGGACTT CAAGCAGATG GCGAGCATGG ATGAAGGGGC CGCGGCATGA
 
Protein sequence
MAQSQAVEVL LRPAVELYTV AVCAGAAFLC LVAPWSLALS PLLGLGSALA FLTLGALRFH 
DAWAILRYRR NIRRLPRYVM TSRDVPVSQQ RLFVGRGFRW DQRHTHRLMQ TYRPEFRRYV
EPTAIYRAAR HFEQRLEFAP YPLSKLAKAL AWDSPLNPAR PLPPVGGLPR LHGIEPHEVD
VTLPLGERVG HSLVLGTTRV GKTRLAELFI TQDIRRKVGG QHEVVIVFDP KGDADLLKRM
YVEAKRAGRE GEFYVFHLGW PDVSARYNAV GRFGRISEVA TRIAGQLSGE GNSAAFREFA
WRFVNIIARA LVELGQRPDY LLIQRHVINI DALFIEYAQH YFARSEPKAW EIIVQLEAKL
NDKNIPRNMI GREKRVVALE QYLSQVRIYD PVLDGLRSAV RYDRTYFDKI VASLLPLLEK
LTTGKIAQLL APNYSDLGDP RPIFDWMQII RKRAVVYVGL DALSDAEVAA AVGNSMFSDL
VSVAGHIYKF GIDDGLPGAS AGVKVPINVH ADEFNELMGD EFIPMVNKGG GAGVQVTAYT
QTMSDIEARI GNRAKAGQVI GNFNNLFMLR VRETITAELL TRQLPKVEVY TTTVMSGATD
SSDPTGNTAF TSNTQDRISS NSVPLIEPAH VVGLPKGQCF ALIEGGHLWK VRMPLPAPDL
DEAMPKDLQE LAGYMRQHYV EAGDWWDSKG LPGLQDQALP DELLADFKQM ASMDEGAAA