Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0671 |
Symbol | |
ID | 8018297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 704219 |
End bp | 704803 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644829446 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002980644 |
Protein GI | 241662284 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.720466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCGG CAATAGCGCT CCGTGCCGGC AGTGTCGCAC TGGCCCTCGG GCTCTGCGCC TGCGCGAGCT TCGCCCTGGC CCAGGAGGTG CCGCCTCCCG CCTACCAGCT CGCCGCGCAG CAGGCGGGCG TGCCGTCGCC GGTGCTGTAT GCGGTCGCGC TGCAGGAGAG CGGTGCCCGG TTGCGCGGCC GCCTGATCCC CTGGCCGTGG ACGCTCAACG TCGCCGGGCG GGCCGAACGC TACGCCACAC GCGCCGAGGC CTGCGCAGGC ATACGCCGGG CGCTGGCCCG GACGCTGGCC AACCGCATCG ACGCCGGCCT CGGCCAGGTC AACCTCGGCT ACCACGCGCA GCGCTACGAC CACCCCTGCG ACCTGCTCGA CCCGTACCGC AACCTCGCCA TCGCCGCGGA AATCCTGCAG GAACAGCACA CGCCGGGCGA GGACTGGCTG GTCGCCATCG GCCGCTACCA CCGTCCCGCG GGTGGCGCGC CCGCCGCCCG TTACCGCCGC AGCGTCCACC AGCACCTGAC CCGCGTGCTA GGGCCGGGCG CCTCCATTCC CTCAGCCCGG AGCCCCATGC CATGA
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Protein sequence | MAAAIALRAG SVALALGLCA CASFALAQEV PPPAYQLAAQ QAGVPSPVLY AVALQESGAR LRGRLIPWPW TLNVAGRAER YATRAEACAG IRRALARTLA NRIDAGLGQV NLGYHAQRYD HPCDLLDPYR NLAIAAEILQ EQHTPGEDWL VAIGRYHRPA GGAPAARYRR SVHQHLTRVL GPGASIPSAR SPMP
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