Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0652 |
Symbol | |
ID | 8018278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 688519 |
End bp | 689016 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829427 |
Product | Protein-tyrosine phosphatase, low molecular weight |
Protein accession | YP_002980625 |
Protein GI | 241662265 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0644228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACGG AAAAAACCTA CAACGCTCTG TTCATCTGCA CGGGCAATTC GGCCCGATCC ATCCTGGCCG AAGGCATCCT CAACGAATTG GGCAAAGGCC GCGTCCGCGC CTACTCGGCG GGCAGTCACC CCAAGGGTGC GGTCCACCCG CTGGCGCTCG CCACGCTCGA ACGTTTGCAC ATGCCGACCG CCGGCTACCG CAGCAAGAGC TGGGACGAGT TTGTTGCGCC CGGTGCACCG GAGTTCGATT TCATCTTCAC CGTCTGCGAC AACGCCGCCG GCGAGGTGTG TCCCATCTGG CCCGGACGCC CGATGTCGGC GCATTGGGGT GTGCCCGACC CTGCGGCCGT CGAAGGTACA GAGGAACAGC AGCGCAAGGC GTTCACGGAT GCGGCGCTGA CGCTGCGCCG GCGCATTGAG CTATTCCTGT CGCTGCCGCT GCAGCGCCTG GATGCCATGT CGCTGCAACG CGAGCTGCGG AACATCGGTC AGCAGTGA
|
Protein sequence | MTTEKTYNAL FICTGNSARS ILAEGILNEL GKGRVRAYSA GSHPKGAVHP LALATLERLH MPTAGYRSKS WDEFVAPGAP EFDFIFTVCD NAAGEVCPIW PGRPMSAHWG VPDPAAVEGT EEQQRKAFTD AALTLRRRIE LFLSLPLQRL DAMSLQRELR NIGQQ
|
| |