| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0624 |
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| Symbol | |
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| ID | 8018250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 657975 |
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| End bp | 659792 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829403 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_002980601 |
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| Protein GI | 241662241 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.365345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA AAGATCAATG GAACATTGGC TACTGGATCG TCGCCGGCCT GTTGCTGCTG
ACGCTGCAGA ACTACTGGCA GGCGGCCAAG ACCGTCGAGC CCGTGCCCTA CAGCGAATTC
GAGAAGGCGC TGGCCGAGGG GCGCGTCGCC GAAGTGCTGG TGTCGGACCG CACGGTCACC
GGGCGCCTGA AATCGCCGGA CAGCCGGGGC AAGACCACCA TCGTGGCCAC TCGCGTCGAA
CCCGACCTGG CCGAGCGGCT GTCCAAGTAC GACGTGCCTT ACGCGCGGGT GGTGGAAAGC
ACCTGGCTAC GTGATGTGCT CTCCTGGATT CTGCCGGCGG TGGCCTTCTT CGGCGTCTGG
TTCTTCCTGT TCCGCCGCTT CGCCGAGAAG CAGGGCATGG GCGGCTTCCT GAGCATCGGC
AAGAGCCGCG CCAAGGTGTT CATGGAGAAG AACACCGGCG TCACCTTTGC CGATGTCGCG
GGTGTCGATG AGGCCAAGGC CGAGCTGGTC GAAATCGTCG ACTTCCTGAA GAACCCGCAG
GATTACGGCC GCCTCGGCGC GCGCATCCCG AAAGGTGTGT TGCTGGTTGG CCCGCCCGGC
ACGGGCAAGA CCCTGCTGGC CAAGGCCGTG GCGGGCGAGG CCGGGGTACC GTTCTTCTCT
ATCTCCGGCT CGGAGTTCGT CGAGATGTTT GTCGGCGTGG GCGCGGCGCG GGTGCGCGAC
CTGTTCGAGC AGGCGCGCGG GCAGGCGCCG GCCATCATCT TCATCGATGA ACTCGACGCG
CTGGGCCGTG CACGCGGCGT CGGCGGGCCC ATCGGCGGCC ACGACGAGCG TGAGCAGACG
CTCAACCAGC TGCTCACCGA GATGGACGGC TTCGACAGCT CGGTGGGGCT GATCATCCTC
GCCGCCACCA ACCGCCCCGA AATCCTCGAC CAGGCGCTGC TGCGTGCCGG CCGCTTCGAC
CGCCAGGTGC TGGTGGACCG GCCCGACAAG AAGGGACGGC TGGACATCCT GAAAGTCCAC
GTCAAGAAGG TGACGCTGGC TCAGGATATC GATCTCGAAC AGGTGGCTGC GCTGACCACA
GGCTTTTCGG GTGCAGACCT CGCGAACCTG GTCAACGAGG CCGCGCTGGC CGCGACCCGG
CGCAAAGCGT CCGCCGTGGA GTTGCAGGAT TTCACCGCCG CCATCGAGCG CATCGTGGCG
GGCCTGGAGA AGAAGAACCG AGTGCTCAAT CCCAAGGAGC GGGAAACCGT GGCCTATCAC
GAGATGGGCC ATGCGCTGGT GGCGCTGGCG CTGCCCGGCA CCGACCCCGT GCACAAGATC
TCGATCATCC CGCGCGGCAT GGGCGCGCTG GGCTACACGC TGCAACGCCC CACCGAAGAC
CGCTTCCTGA TGACGCGCGC CGATCTGGAA CACAAGATCG CCGTGCTGCT GGGCGGTCGT
GCGGCCGAGA AGCTCGTGTT CGGCGAGCTG TCCACCGGGG CTGCCGATGA CCTCGCACGG
GCCACCGACA TTGCCCGCGA CATGATCACC CGCTTTGGCA TGGACGAAGG ACTGGGCTAC
ATCGCCTTCG AGGCGCAGCG GCCCCGCTTT CTCGATACAC CGGAACTGGC CCACGGCGGT
TGCCGGGTGG CCGAATCGAC CCAGGCGCGC ATCGATCAGG CTATCCGCGA CATCGTGATG
GGCGTGTTCG AGCGCGCCTA CCGGATTCTC GACATCAACC GCGCGGTGCT GGAGCGCTGT
GCGCGCGAGC TGCTGGCGCG GGAAACGCTC GACGAAAGCG ATATCCGTCA ATTGACTCAA
GGACTTGTTC GGAACTGA
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| Protein sequence | MEKKDQWNIG YWIVAGLLLL TLQNYWQAAK TVEPVPYSEF EKALAEGRVA EVLVSDRTVT
GRLKSPDSRG KTTIVATRVE PDLAERLSKY DVPYARVVES TWLRDVLSWI LPAVAFFGVW
FFLFRRFAEK QGMGGFLSIG KSRAKVFMEK NTGVTFADVA GVDEAKAELV EIVDFLKNPQ
DYGRLGARIP KGVLLVGPPG TGKTLLAKAV AGEAGVPFFS ISGSEFVEMF VGVGAARVRD
LFEQARGQAP AIIFIDELDA LGRARGVGGP IGGHDEREQT LNQLLTEMDG FDSSVGLIIL
AATNRPEILD QALLRAGRFD RQVLVDRPDK KGRLDILKVH VKKVTLAQDI DLEQVAALTT
GFSGADLANL VNEAALAATR RKASAVELQD FTAAIERIVA GLEKKNRVLN PKERETVAYH
EMGHALVALA LPGTDPVHKI SIIPRGMGAL GYTLQRPTED RFLMTRADLE HKIAVLLGGR
AAEKLVFGEL STGAADDLAR ATDIARDMIT RFGMDEGLGY IAFEAQRPRF LDTPELAHGG
CRVAESTQAR IDQAIRDIVM GVFERAYRIL DINRAVLERC ARELLARETL DESDIRQLTQ
GLVRN
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