Gene Rpic12D_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0607 
Symbol 
ID8018233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp642649 
End bp643416 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID644829386 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002980584 
Protein GI241662224 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.118397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.590685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTGGC TGACGCCTAC CGCCGTGACC GATCAAGATT CCGACTCCTC CTCCAAACGC 
TGGACGCGCC GCAAAGAGGC CCGCCCCCAA GAACTGGTCG CCGCCGCGCT GAACCTGTTC
GTGGCGCGCG GCTATGCGGC CACGCGGCTG GAAGACGTGG CGTCGGCGGC CGGCGTGTCC
AAGGGCACGG TGTACCTGTA CTTCGCCAAC AAGGAAGAGC TGTTCAAGGC CGTGGTGCAG
GAAAACCTGG TGCCCGCGCT GGCCGAGGGC GAGGCCCTGA TCGACAGTTT CGACGGCACC
AGCGAAGCGC TGCTGCATGA GATCCTGATG GGCTGGTGGG AACTCATCGG CGAATCGCCG
GCTTCGGGTC TCACCAAGCT GCTGATGGCC GAGTCGGGCA ACTTTCCCGA CCTGGCGCAG
TACTACCACG AAGAAGTCAT CGACCGCTGC GACCGCCTGT TCGCGCGCAT CCTCGAACGC
GGCATGGCCC GCGGCGAATT CCGTGACGTC AACATCGACC TCACCACGCT GACCATGGTC
GCGCCGATGA TCTTCCTGAT GATGTGGAAG CATTCGTTCG GCCCCTGCTC GCACCGGGAG
CTGGAACCGA AGACGTTTAT CGCCCACGTC GTGTCGCTGC TGCTGCACGG CGTGCTACGC
AATCCGGCGA CCGGCGCGGT GATTCCGCCA CCACCCGCCC TCACCGCGCA ACCGTGGCGC
CCCTTGCCCG AGGGCGGCAA CAACCCCGAT CAAGGCGCCT CGTCATGA
 
Protein sequence
MRWLTPTAVT DQDSDSSSKR WTRRKEARPQ ELVAAALNLF VARGYAATRL EDVASAAGVS 
KGTVYLYFAN KEELFKAVVQ ENLVPALAEG EALIDSFDGT SEALLHEILM GWWELIGESP
ASGLTKLLMA ESGNFPDLAQ YYHEEVIDRC DRLFARILER GMARGEFRDV NIDLTTLTMV
APMIFLMMWK HSFGPCSHRE LEPKTFIAHV VSLLLHGVLR NPATGAVIPP PPALTAQPWR
PLPEGGNNPD QGASS