Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0603 |
Symbol | |
ID | 8018229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 639303 |
End bp | 639965 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829382 |
Product | protein of unknown function DUF306 Meta and HslJ |
Protein accession | YP_002980580 |
Protein GI | 241662220 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3187] Heat shock protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.112924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAC CGAATCGACC CAAGCCGAGC CTGCTGCAAA CGCCGCGCCG CGTGGTGCTG ACCGCCGCGG CGCTGGCCGC AATGACCGCC GCCACCATCA TCGGTGCCGG CTGCATGACG CCAACGCCTT CGTCCTCGCC CGCCGCGGCA GCCCCCGCCG CTGCAACCAA ACAGACTCCT GCCAACGCCG CACCCAATAC GGGCCAGGCG TCGCTCGCCC AAGCGCAGGG CGAAGGCCGC TCGCGGTTCG TGCTCGTGCG TTGGCAAGAG TCGGGCGCTG CGCCCAAGGA GTTGCCCTCT GCCGAAGGCG ACGACGCTGA CCCGGCTACG CAGCCAATTT CCATCGAATT CAGCGCTGGC CTGGAGGCGG CCAACGGCGT GGTGTCGGGC TATTCGGGCT GCAATCGCTT CTCGGGGCCG TATGAGAAGC TCGCCTCGGG CATGCGCTTC GGCAACCTGG TGTCGACGCG CATGGCATGT GACCCGGCGC GCATGGAGTT GGAAACCGCG TTCCTGGAGG CGCTCAAGTC GCCGCTGGCG ACCGTCGGTA TGCAGCCGTC GTCCAACGGC AAGCAGGGCC GCCAAGTCAT CTGGAAAACG AGCGGCGGCG CGCTGCTGCA GTTTGCCGAG CGGCCTCTGC CACCGCGCGG CCAGACTCAT TGA
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Protein sequence | MSQPNRPKPS LLQTPRRVVL TAAALAAMTA ATIIGAGCMT PTPSSSPAAA APAAATKQTP ANAAPNTGQA SLAQAQGEGR SRFVLVRWQE SGAAPKELPS AEGDDADPAT QPISIEFSAG LEAANGVVSG YSGCNRFSGP YEKLASGMRF GNLVSTRMAC DPARMELETA FLEALKSPLA TVGMQPSSNG KQGRQVIWKT SGGALLQFAE RPLPPRGQTH
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