Gene Rpic12D_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0603 
Symbol 
ID8018229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp639303 
End bp639965 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID644829382 
Productprotein of unknown function DUF306 Meta and HslJ 
Protein accessionYP_002980580 
Protein GI241662220 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.112924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAC CGAATCGACC CAAGCCGAGC CTGCTGCAAA CGCCGCGCCG CGTGGTGCTG 
ACCGCCGCGG CGCTGGCCGC AATGACCGCC GCCACCATCA TCGGTGCCGG CTGCATGACG
CCAACGCCTT CGTCCTCGCC CGCCGCGGCA GCCCCCGCCG CTGCAACCAA ACAGACTCCT
GCCAACGCCG CACCCAATAC GGGCCAGGCG TCGCTCGCCC AAGCGCAGGG CGAAGGCCGC
TCGCGGTTCG TGCTCGTGCG TTGGCAAGAG TCGGGCGCTG CGCCCAAGGA GTTGCCCTCT
GCCGAAGGCG ACGACGCTGA CCCGGCTACG CAGCCAATTT CCATCGAATT CAGCGCTGGC
CTGGAGGCGG CCAACGGCGT GGTGTCGGGC TATTCGGGCT GCAATCGCTT CTCGGGGCCG
TATGAGAAGC TCGCCTCGGG CATGCGCTTC GGCAACCTGG TGTCGACGCG CATGGCATGT
GACCCGGCGC GCATGGAGTT GGAAACCGCG TTCCTGGAGG CGCTCAAGTC GCCGCTGGCG
ACCGTCGGTA TGCAGCCGTC GTCCAACGGC AAGCAGGGCC GCCAAGTCAT CTGGAAAACG
AGCGGCGGCG CGCTGCTGCA GTTTGCCGAG CGGCCTCTGC CACCGCGCGG CCAGACTCAT
TGA
 
Protein sequence
MSQPNRPKPS LLQTPRRVVL TAAALAAMTA ATIIGAGCMT PTPSSSPAAA APAAATKQTP 
ANAAPNTGQA SLAQAQGEGR SRFVLVRWQE SGAAPKELPS AEGDDADPAT QPISIEFSAG
LEAANGVVSG YSGCNRFSGP YEKLASGMRF GNLVSTRMAC DPARMELETA FLEALKSPLA
TVGMQPSSNG KQGRQVIWKT SGGALLQFAE RPLPPRGQTH