| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0602 |
|---|
| Symbol | |
|---|
| ID | 8018228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 637874 |
|---|
| End bp | 639190 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644829381 |
|---|
| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| Protein accession | YP_002980579 |
|---|
| Protein GI | 241662219 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.338886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCC TTCTGTATCG CTGGTTGTGG CGCATCGCGC TGCCGTTTGC GTTGGTGCGC
CTCTGGTGGC GCGGTCGCAA GGAGCCCGGT TATCGCCAGC ACGTCGGCGA GCGGCTGGGT
TTCTACCCGC CGCGCCCGAA TCCGGATCGT CCATTGCTGT GGGTGCATGC GGTGTCCGTT
GGCGAGACAC GCGCCGCGCA GCCGCTCATC GATGCGCTGC TTGCGCGCTT TCCGCACCAC
GCTGTCCTGC TGACGCACAT GACGCCGACG GGCCGCCGCA CCGGCGCTGA ATTCGCGGCG
CAGCGCAACG GCCGCGTCAT CCAGGCCTAT CTTCCGTACG ATTTGCCCAG CGCAGTCGAT
CGGTTTCTGC GCCATTTCCA ACCGCGCCTT GGGCTGCTGA TGGAGACCGA GATTTGGCCG
GTGCTGATTG AGCGCGCCTA TGCGGCTGGT GTGCCGATGG TGCTCGTCAA CGGGCGCCTG
TCTGCGCGCA GTCACCGGCG CACCGCACGC CTCGGTGACG CCGCGCGCCA GACGTACGGG
CAACTCGCCG CGGTGCTGGC ACAGACGCCC GACGATGCTG ATCGCTACCG CTCGCTCGGC
GTGCCGCGCG TGCGGGTGAC CGGCAACCTG AAGTTCGACA TCACGCCGCA TGTGGACCAG
ATCATGGCTG GCCGCGTGCT GCACGATGCA TTGCACGGTC GCTCAGCATG GGTGGCGGCC
AGCACGCGTG AGGGCGAAGA GGCGTTGCTG CTCGACGCAT GGCTGGCACA TCGCGCGCAG
CATGTCGGGC GCCGGCATGC GTTGCTGATC CTTGTGCCGC GTCATCCTCA GCGCTTTGAT
GAAGCGGGCC AGGCCGCCGA GCGCGCGGGC CTACGCGTCG TGCGTCGCAG TGCGTTGTCG
GTGTCGGCAG CAGGGTTGAC GGATTCCGAT CGACTTGCTG AGGCCGATGT CTTGCTTGGT
GATTCGATGG GCGAGATGGC GCTGTATTAC GCAGCTGGCG AAGTGGCCTT CATTGGCGGT
AGTCTGCTTC CGCTCGGTGG ACAGAACTTG ATCGAGGCCT GCGCAGTTGG CACGCCCGTG
GTCATCGGCC CGCATACATT CAACTTCGCG CAGGCAACGC GCGATGCAGT GGCCGCAGGC
GCGTGCGCGC AGGTGGCCGA TGCCGCCGCG GCCGTACGTG TGATCGACGC GTGGCTGTCC
GATGCCGATG CGCGCGAAGC CGCATCACGT GCCGCGCTGG CGTTTGCCGC CACACACGGC
GGTGCGACGG CCCGTACGGT GGAGGCGGTG GCGTCTCTCG TCTTGCCGAC GCTGTAA
|
|---|
| Protein sequence | MLRLLYRWLW RIALPFALVR LWWRGRKEPG YRQHVGERLG FYPPRPNPDR PLLWVHAVSV
GETRAAQPLI DALLARFPHH AVLLTHMTPT GRRTGAEFAA QRNGRVIQAY LPYDLPSAVD
RFLRHFQPRL GLLMETEIWP VLIERAYAAG VPMVLVNGRL SARSHRRTAR LGDAARQTYG
QLAAVLAQTP DDADRYRSLG VPRVRVTGNL KFDITPHVDQ IMAGRVLHDA LHGRSAWVAA
STREGEEALL LDAWLAHRAQ HVGRRHALLI LVPRHPQRFD EAGQAAERAG LRVVRRSALS
VSAAGLTDSD RLAEADVLLG DSMGEMALYY AAGEVAFIGG SLLPLGGQNL IEACAVGTPV
VIGPHTFNFA QATRDAVAAG ACAQVADAAA AVRVIDAWLS DADAREAASR AALAFAATHG
GATARTVEAV ASLVLPTL
|
|---|
| |