| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0597 |
|---|
| Symbol | |
|---|
| ID | 8018223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 632684 |
|---|
| End bp | 633280 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644829376 |
|---|
| Product | sugar transferase |
|---|
| Protein accession | YP_002980574 |
|---|
| Protein GI | 241662214 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.285511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCA AGCGGCTTTT TGATCTCGTT GCGAGTGCAG CGGGGCTGCT TCTGTTGGCG
CCAGTGTTCC TGGTGATTGC GATCGCCATC AAGCGAGAGT CGCCTGGTCC GGTCTTTTTT
CGCCAGGAGC GAGTAGGTCT GGGAGGTCGT ACCTTTCGCA TCCACAAGTT CCGCACGATG
GTCGTGTCAG GTGAGGGGCG GGGGCCGCTA ATCACGGTCG GTGCTGATCG CCGTATCACC
TCCAGTGGGG CATTCCTGCG CAAGTACAAG TTGGATGAGC TCGCGCAGTT GATCGATGTC
TTTGTCGGGG ATATGAGTCT TGTGGGGCCA CGGCCCGAGG TGCCGAAGTA CGTCGCACTT
TATCCAGAGG ATGTGCGAGC AATCGTCTTG AGCGTTCGGC CGGGGATCAC CGATCTTGCT
TCGATCGAGT ATCGACATGA GAACGCTCTC TTGGGCAACA GCCAGGACCC AGAGCGAACG
TATGTCGAAG AGGTGATGCC AGCAAAGTTG CGCTATTGCG TGGACTATGT GCGGAATCGA
TCGCTCGGCC TTGATCTGCG TATCATCTGT CGCACGGTTC TCGCCGTGTT CACTTAG
|
|---|
| Protein sequence | MMIKRLFDLV ASAAGLLLLA PVFLVIAIAI KRESPGPVFF RQERVGLGGR TFRIHKFRTM
VVSGEGRGPL ITVGADRRIT SSGAFLRKYK LDELAQLIDV FVGDMSLVGP RPEVPKYVAL
YPEDVRAIVL SVRPGITDLA SIEYRHENAL LGNSQDPERT YVEEVMPAKL RYCVDYVRNR
SLGLDLRIIC RTVLAVFT
|
|---|
| |