Gene Rpic12D_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0592 
Symbol 
ID8018218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp627743 
End bp628369 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content53% 
IMG OID644829371 
ProductAcetyltransferase (isoleucine patch superfamily)-like protein 
Protein accessionYP_002980569 
Protein GI241662209 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCA GACTCTATAA AAAGAGCTTT CTGTGGCGCT GGTGGGTGAC CATCTATTTC 
CTTTGTCGTG GCGTGCGAGT TGATCCAAGG GCCATGTTTA TGGCATCACT TTCACATGTC
AAGCTTGGGC GTGGTACGAG CATCTCCAAG GATGTGATTA TTAATCTTTC GGGCGACGGC
AGGCTTGAGA TGGCTAACGA CACGTGGCTG TCGCACGGTG TGGAGATTGA ATCGGAGGGG
CTCATCACCA TCGGCGAAGG TACAACGATT CAGCGGCGCT GTTCGCTGAA CGGCACGATC
TCGATTGGTC GCGGTTGTAT CTTTGCTCCC AATGTTTTCA TCTCTTCGGG GTCGCATATT
TTTGCGGCCT GGCCAGAACT GCCGATTCGC GAGCAGGAGG CCAAGTACGC CGCTTTGCCA
GTCGATAACC GACCTAAAGG TTTTGAAGGT AAACCGGTCG TCATCAACGA TGACTGCTGG
CTTGGTGTGA ACGTTGTTGT CATGCCTGGT GTAGAAATTG GTAGGGGCTG CATTATTGGC
GCTAACTCGG TCGTCACGCG GTCGCTACCT GAGTTTTCGG TTGCCGTTGG TGCTCCAGCC
ATTGTCAAAT CCAAGAGGTT GGCATGA
 
Protein sequence
MIGRLYKKSF LWRWWVTIYF LCRGVRVDPR AMFMASLSHV KLGRGTSISK DVIINLSGDG 
RLEMANDTWL SHGVEIESEG LITIGEGTTI QRRCSLNGTI SIGRGCIFAP NVFISSGSHI
FAAWPELPIR EQEAKYAALP VDNRPKGFEG KPVVINDDCW LGVNVVVMPG VEIGRGCIIG
ANSVVTRSLP EFSVAVGAPA IVKSKRLA