Gene Rpic12D_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0575 
Symbol 
ID8018201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp609883 
End bp610800 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content59% 
IMG OID644829354 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002980552 
Protein GI241662192 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.496729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCATA AGGTGTCTCC CCTTCCCGTC ATCCTCCTCA TCGGAAAAAA CGGCCAGGTC 
GGCTTCGAGT TGCGGCGCAG CCTTGCGCCA CTCGGGCGAG TTGTTGCGCT TGGTCGCGCA
GACTGCGATC TCACCCAGCC AGATCAATTG CGCCAGGCAG TGCGAGCTTT TCAGCCCGAC
GTGGTGATCA ATGCGGCCGC GTATACGGCC GTCGACAATG CCGAAACGGA ACCCGACGCC
GCGCTTGCCG TCAATGGCGT CGCTCCGGGT GTACTGGCTG AGATGGTTCG GACAAATGGT
GGACTTTTGG TCCATTACTC CAGTGACTAT GTGTTCGATG GAGCGAAAGA TTGCCCCTAT
CTGGAAACGG ACGTCCCGAA TCCGCAATCC GTGTACGGTC GAACAAAGCT GGAGGGCGAG
CGTGCGATCG CTGCCAGTGG GGCCAATGCG CTTGTGCTGC GGACAAGCTG GGTTGCGGGT
GCCCACGGTG ACAATTTTGT CAAAGCCATC TTGCGCCAGG CACGTGAGCG CAAGCATTTG
CGGGTGATTG CGGATCAGCT TGGTGCGCCA ACCTCAGCAT CGCTGATTGC CGATGTCACC
GCGCAGATCG TCGCGCGACA CTGGGTCTAT GGTGAGCGCG ACGCGTTGAT GCCAGGCGTC
TACCACCTCG CCGCGGCTGG TCAAACGACT TGGCATGGCT ACGCGAGTGA GGTACTGCGC
TACGCTGCCG GACGTTGTGT GGACCTGAAG GCGGCTGTGG CTGGCATTGA AGCGATTCCA
GCCGTCAAAT GGCACTCGCG GGCCTCGAGG CCTGCCAATT CTTGTCTGGA TACGAGCAAG
CTCCGTGAGA CCTTTGGCGT CCATTTGCCG AATTGGCAAG AGGGGATTCA GTGCTTACTC
GAACAAATTT TTCCCTGA
 
Protein sequence
MVHKVSPLPV ILLIGKNGQV GFELRRSLAP LGRVVALGRA DCDLTQPDQL RQAVRAFQPD 
VVINAAAYTA VDNAETEPDA ALAVNGVAPG VLAEMVRTNG GLLVHYSSDY VFDGAKDCPY
LETDVPNPQS VYGRTKLEGE RAIAASGANA LVLRTSWVAG AHGDNFVKAI LRQARERKHL
RVIADQLGAP TSASLIADVT AQIVARHWVY GERDALMPGV YHLAAAGQTT WHGYASEVLR
YAAGRCVDLK AAVAGIEAIP AVKWHSRASR PANSCLDTSK LRETFGVHLP NWQEGIQCLL
EQIFP