| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0571 |
|---|
| Symbol | |
|---|
| ID | 8018197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 605747 |
|---|
| End bp | 607024 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644829350 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_002980548 |
|---|
| Protein GI | 241662188 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC ATATCAAAGG CGGCCGCCTG ATCGACCCGG CCAACGGTAT CGACGCACAA
CAGGACTTGT ACATCGCGGC AAGCAAGGTG GTCGGTGTCG GCCACGCGCC GGCAGATTTC
CATGCCAACA AGACCATCGA CGCGACGGGC CTGGTTGTTT GCCCGGGCCT GATTGACTTG
TCCGCCCGCC TGCGCGAGCC GGGTTTCGAA TACAAGGCCA CGCTCGAATC GGAAATGGCC
GCGGCCATGG CCGGCGGCGT GACCTCGCTG GTGTGCCCGC CGGACACCGA TCCTGTGCTG
GACGAACCCG GCCTGGTCGA GATGCTCAAG TTTCGCGCGC GCAACCTGAA CCAGGCGCAT
GTGTATCCGC TCGGTGCGCT CACTGTCGGC TTGAAGGGCG CGGTGCTGAC GGAGATGGCC
GAATTGACAG AGTCTGGCTG CGTGGGCTTC TCGCAGACCG ATGCGCCGAT GGCCGACACG
CAAGTGCTGA TGCGTGCGCT GCAATACGCG CAGACCTTTG GCTTCACCGT CTGGCTGCGC
CCCGAAGACC CGTATCTGGG CAAGGGCGGC GTGGCCGCAA GCGGCCCGCT GGCTTCACGC
CTGGGCCTCT CGGGTGTGCC GGTAATCGCC GAGACGGTGC GCCTGCATAC CATCTTCGAA
CTGATTCGCA GCACAGGCGC CCGCGTTCAC CTGTGCCGTT TGTCGTCGGC CGCCGGCATC
GAGCTTGTAC GCCGCGCAAA AGCCGAAGGC CTGCCGGTCA CGTGCGATGT GAATGTCCAC
CACATCTCTC TGACCGACGT CGACATCGGC TACTTCAATT CGCAGATGCG CTTCGTGCCG
CCGCTGCGTT CCGGGCGCGA CCGCGATGGC ATTGTGCGTG CGCTGGCGGA TGGCACGATC
GATGCGATCT GCTCCGACCA CACGCCCGTG GATGACGACG AGAAGCTGCT GCCGTTTGCC
GAGGCCACGC CGGGTGCGAC CGGCCTCGAA ACCCTGCTGC CGCTCACGTT GCGCTGGGCC
ACCGAACACA AGGTCGAGCT TTCGAAGGCG CTGGCCCGCA TCACCAGCGA GCCTGCTCGC
GTGCTGGGCC TGCATGCGGG TTCGCTGGAA GTGGGTGCGA TGGCCGATGT GTGTGTATTC
GATCCGGACG CGACCTGGAA ACTCGAGCCG CGCGCTCTGC GCAGCCAGGG CAAGAACTCG
CCGTACCTTG GCTTTGAGCT GGCCGGCCGC GTGCGCGCCA CAATGGTCGC CGGCCACCTT
GCCTATGACG GGCATTGA
|
|---|
| Protein sequence | MKLHIKGGRL IDPANGIDAQ QDLYIAASKV VGVGHAPADF HANKTIDATG LVVCPGLIDL
SARLREPGFE YKATLESEMA AAMAGGVTSL VCPPDTDPVL DEPGLVEMLK FRARNLNQAH
VYPLGALTVG LKGAVLTEMA ELTESGCVGF SQTDAPMADT QVLMRALQYA QTFGFTVWLR
PEDPYLGKGG VAASGPLASR LGLSGVPVIA ETVRLHTIFE LIRSTGARVH LCRLSSAAGI
ELVRRAKAEG LPVTCDVNVH HISLTDVDIG YFNSQMRFVP PLRSGRDRDG IVRALADGTI
DAICSDHTPV DDDEKLLPFA EATPGATGLE TLLPLTLRWA TEHKVELSKA LARITSEPAR
VLGLHAGSLE VGAMADVCVF DPDATWKLEP RALRSQGKNS PYLGFELAGR VRATMVAGHL
AYDGH
|
|---|
| |